Pairwise Alignments

Query, 214 a.a., DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 242 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 11/142 (7%)

Query: 1   MVASALPAKIKNIDKLLVHC-QRRRYTAKSNIICAGDRAETLSFIIKGSVTILIED--DD 57
           ++ +  PA++ +    L HC Q +   A+  +   GD A  L +I  G V + + D  ++
Sbjct: 9   LLQTCTPAELAD----LAHCLQPQTLQAQEALFHCGDPAAALYWIRSGRVGVFVADGSNN 64

Query: 58  GHEMIIAYLNHGDFFGELGLFEPVDGEQQRSAWVRAKTECEVAEISYEKFRELARQDPEI 117
            HE ++  L  G   GE+ L   +DG Q RSA  RA    ++  ++ + F++L  + P+ 
Sbjct: 65  QHESLLRVLGAGALLGEMAL---IDG-QPRSATCRALEPTQLYAVTSQDFQQLLTRSPQF 120

Query: 118 LYALGSQMAQRLRNTTRKVGDL 139
           + AL + ++QRLR T + + ++
Sbjct: 121 VQALLATLSQRLRYTNQFLSEV 142