Pairwise Alignments

Query, 214 a.a., DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 231 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score = 57.0 bits (136), Expect = 3e-13
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 23  RRYTAKSNIICAGDRAETLSFIIKGSVTILIEDDDGHEMIIAYLNHGDFFGELGLFEPVD 82
           R Y A   ++   D ++    I  G   + I    G E+I+  L  G+ FGEL       
Sbjct: 31  RHYPAGQAVLLEHDWSDGYYLITAGIAKVAIASSGGDEVIVGLLGAGELFGELRAL---- 86

Query: 83  GEQQRSAWVRAKTECEVAEISYEKFRELARQDPEILYALGSQMAQRLRNTTRKVGDLAFF 142
           G + R+A V A T  +V  +      +  + +P++   L   +A+RL  T R+    +  
Sbjct: 87  GFEARTAEVTALTALQVIHLQSTPLSQALQVEPQLGLRLAQGLARRLLETNRRFAYRSE- 145

Query: 143 DVTGRVAR---CLLELCKQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKDLEERS 199
           D T RV     CL +    P   +    + + I    +G + G +RE   R L  LE+R 
Sbjct: 146 DATARVVEALDCLAQKAALPQTTSAWQPVPL-INVSIVGSLAGMARETASRELSTLEKRG 204

Query: 200 LV 201
            +
Sbjct: 205 FL 206