Pairwise Alignments

Query, 214 a.a., DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 211 a.a., cAMP-regulatory protein (RefSeq) from Shewanella loihica PV-4

 Score =  263 bits (671), Expect = 2e-75
 Identities = 129/208 (62%), Positives = 166/208 (79%), Gaps = 3/208 (1%)

Query: 7   PAKIKNIDKLLVHCQRRRYTAKSNIICAGDRAETLSFIIKGSVTILIEDDDGHEMIIAYL 66
           P     ++  L HC   +Y AKS +I AG+ ++TL +I+KGSV +LI+D++G EMI++YL
Sbjct: 7   PKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKEMILSYL 66

Query: 67  NHGDFFGELGLFEPVDGEQQRSAWVRAKTECEVAEISYEKFRELARQDPEILYALGSQMA 126
           N GDF GELGLFE    + +R+AWVRAK  CE+AEISY+KF++L + +PEIL  L SQMA
Sbjct: 67  NQGDFIGELGLFEE---QAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSSQMA 123

Query: 127 QRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKITRQEIGRIVGCSRE 186
            RL++T++KVGDLAF DV GR+A+ LL L KQPDAMTHPDGMQIKITRQEIG+IVGCSRE
Sbjct: 124 YRLQSTSQKVGDLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRE 183

Query: 187 MVGRVLKDLEERSLVQVKGKTMVVHGTR 214
            VGR+LK LEE++L+Q  GKT+VV+GTR
Sbjct: 184 TVGRILKMLEEQNLIQAHGKTIVVYGTR 211