Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (376), Expect = 6e-41
 Identities = 76/240 (31%), Positives = 136/240 (56%), Gaps = 1/240 (0%)

Query: 23  LILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALKNSIIVAPAAT 82
           L+ LFL LP++V++  SFN   F +    GF+ +WY     +   M+A  +SI VA  + 
Sbjct: 12  LVYLFLYLPIIVLIANSFNENKFGI-KWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70

Query: 83  VLAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFTSL 142
             A + G+L A+ L R  F GK +V  ++   M+ P +++ ++    F  +G    F +L
Sbjct: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTL 130

Query: 143 ILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPLIAPGVISGALF 202
           ++ H    +PFV++TV   L GF+  ++ AA  LGA   +  +++ LPL  P V +G L 
Sbjct: 131 LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLL 190

Query: 203 AFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTLEWL 262
           +F  S D+V+++ F+ GP    LP +++S ++  +SP + A AT+++  S++L++  + L
Sbjct: 191 SFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLL 250