Pairwise Alignments

Query, 415 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (408), Expect = 2e-44
 Identities = 79/214 (36%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 192 IYLDIFVRTLWMGVVITTICLVLAYPLAYLLANLPTRQSNLLMILVLLPFWTSILVRVAA 251
           +Y  + + + +M +V T ICLV+ YP AY++A +P +    ++ L+++PFWT+ L+R   
Sbjct: 61  LYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYG 120

Query: 252 WIVLLQSGGLINSALMAMGIIDQPLELVFNRTGVYISMVHILLPFMILPLYSVMKGISPS 311
             ++L + G++N ALM++G+ID PL ++F  T V I +V+ILLPFMILPLYS ++ +  +
Sbjct: 121 LKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGT 180

Query: 312 YMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALLGSPNDQMVSYF 371
           Y+ AA  LG + F +  RV  P T  G+  GCLLV + A+G +    LLG   + ++   
Sbjct: 181 YIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNV 240

Query: 372 VAFYTNTSINW--GMATALGGLLLLATVLLYLIY 403
           +      + +W  G AT++  L L   ++LY  Y
Sbjct: 241 IKSQVLNARDWPFGAATSI-ALTLAMAIMLYAYY 273