Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 8e-17
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 36/322 (11%)

Query: 7   LTALALGLFTAGQAMAAD--LTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYNGEM- 63
           +  L L    A   + A+  L V ++GG      +KAF +  ++         E N  M 
Sbjct: 5   IKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQ--QEGVTINYSTFENNESMY 62

Query: 64  AKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCGVGF- 122
            K+K +   K   +++V   +  + +   EG+  E+D     N  D +P  +   G+   
Sbjct: 63  TKLKLL---KGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVL---GLAHD 116

Query: 123 --------FVWS-TVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGAKYTMEFALMAD 173
                   ++W  T + YN+  L    T WAD WD KQ+  +  L    +     AL  +
Sbjct: 117 PQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWD-KQYEQQVMLIDDIRDVFGMALKLN 175

Query: 174 GVAPKDVYKVLATKEGQD--RAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSAYNGR 231
           G +       + TK  ++  +A++ L  LK ++  + + A    ++ SG+  +   +NG 
Sbjct: 176 GFS-------INTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYV-SGEATLGMQWNGN 227

Query: 232 IAAVQKES-NLKVVW--NGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIA 288
               Q E   LK V    G +   D + IP G+KN+  A KFI +  +PE Q    +++ 
Sbjct: 228 AYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLG 287

Query: 289 YGPANSKAVSLLSDEVKKDMPT 310
           Y  A     +LL  E+ +D PT
Sbjct: 288 YASATKGGRALLPAEL-RDNPT 308