Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator UhpA from Pseudomonas putida KT2440

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  135 bits (341), Expect = 4e-37
 Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 13/215 (6%)

Query: 2   IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN 61
           +++L+ +DH +VR+G   L+          EA +GEQ LE ++ +   +V+LD+ +PG++
Sbjct: 1   MKILLVDDHAVVRQGYASLLKALLPEVTVSEAASGEQALEQVQQSIPSLVVLDLGLPGIS 60

Query: 62  GLEAIPRIRALHDAPAILMLSMHDEAQMAARALKAGAAGYATKDSDPALLLTAIRRVAGG 121
           GLE   R+R       +L+ SMHDE  +  +AL AGA+GY TK   P +L+ A+R+V  G
Sbjct: 61  GLETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLAG 120

Query: 122 GRYIDPSLADRMVFEVGLTESRPLHT-------LLSEREFSVFERLAQGANVNDIAQQLA 174
             +I+  LA        L   RP H+        ++ RE  +F  LA+G    +IA++L 
Sbjct: 121 QTFIEQPLA------TDLACQRPSHSPAKGRLAEMTPREMEIFIMLARGIGNREIAERLC 174

Query: 175 LSSKTISTHKARLMQKLKVNSLAELVKYAMEHKLI 209
           +SSKT+S H A L  KL V+S AELV  A++  L+
Sbjct: 175 ISSKTVSNHMALLKSKLGVSSQAELVHLAIDLGLL 209