Pairwise Alignments

Query, 795 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  207 bits (527), Expect = 2e-57
 Identities = 134/375 (35%), Positives = 201/375 (53%), Gaps = 10/375 (2%)

Query: 429 LVVYLADVTERHRALAALRES---EARLKGIAGNVPGLVFRLERDPAEGDLEFPYISEGS 485
           LV    D+T R +A   LR+    + +L  +A +VPG+++ ++  P +G    PY  +GS
Sbjct: 407 LVTIHMDITARRQAEEGLRQRLMLQDKLARVAASVPGVIYSIKLRP-DGTFCIPYAMQGS 465

Query: 486 EALVGYAPSEIQHPQM-GLRNLVHPEDRADYHRVQDLALASDQD---WSWQGRILTRQGE 541
             + G  P ++       L  ++     AD  RV  + L S +    W  + R+   QG 
Sbjct: 466 VDIFGLRPEDLTEDLTEDLGPVLSRIHGADQERVLAVVLESARTMAPWHCEFRVHHPQGG 525

Query: 542 QRWADIKASARHLGNGQVVWDGVVWDITQGKRAELALAKSQEQLRELSAHLESVREEEKA 601
            RW + KA  R   +G V+W G + D++  K+A+  L +S++QLR L+  L+ VREEE++
Sbjct: 526 VRWVESKAVPRLEDDGCVIWHGYIHDVSARKQADAELMRSRDQLRALNEGLQRVREEERS 585

Query: 602 RIAREVHDELGQMLTVLKLEVSMCELAYAELDPGLNDRLASMKRLIAQLFQLVRDVATAL 661
           RI+ E+HD+LGQ LTVLKLE++               RL  + RLI    + VR ++  L
Sbjct: 586 RISLEIHDQLGQSLTVLKLEMAWLRARLLGGQAEEKTRLQEVGRLIDDTLRAVRTISWDL 645

Query: 662 RPPILDA-GIASAIEWQARRFEARTQIPCLVQVPDNLPALSDAKATGLFRILQEALTNVM 720
           RP ILD  G+ + +EW    F  R  I C V VP     L D  AT LFRI QE LTNV 
Sbjct: 646 RPGILDTLGLGAGVEWLVDDFRRRLGIRCNVVVPRERLELPDVLATHLFRICQELLTNVA 705

Query: 721 RHAQAHSVEIELVREGGQLRMTVSDDGQGFCREQTRPTSFGLVGVRERVLMLGGSMTLES 780
           RHAQA+ +++ L    G++ + V D+G+G         S GL+G++ER    GG + + +
Sbjct: 706 RHAQANRIDVSLGLADGRVLLEVRDNGRGMPMLPAHGHSLGLLGIKERAAQCGGEVHIAT 765

Query: 781 EPG-EGTSLSVAIPL 794
            P  EGT + V +PL
Sbjct: 766 RPEIEGTRVRVLVPL 780



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 20/72 (27%), Positives = 31/72 (43%)

Query: 399 QFETQCRRADQSLLPVELSLSFLRFRDSEYLVVYLADVTERHRALAALRESEARLKGIAG 458
           Q E   RR D  +  + +S+  +      YL   L DVTE  R+ A    +E     I  
Sbjct: 245 QSERSIRRPDGQVRHLLISVDLVFLDSERYLQWTLLDVTENRRSQALASRNEILTNAIMN 304

Query: 459 NVPGLVFRLERD 470
           ++   V  L+R+
Sbjct: 305 SLDVAVAVLDRE 316