Pairwise Alignments

Query, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Pseudomonas fluorescens FW300-N2E2

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)

Query: 286 LRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDL 345
           L ++    HILI+ ++  +EA  +   E +  R+  GE F  LAK FS+DPGSA NGGDL
Sbjct: 261 LSEQRRAAHILIEVNDKVTEAQAKAKIEEIQARLAKGESFEALAKEFSQDPGSANNGGDL 320

Query: 346 NWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATD-STEQAREQQALSV 404
            +  P    PEF + +    +  V+ P +T +G H++++LG  A +  T  + + +    
Sbjct: 321 GYAGPGVYDPEFEKALYALNKDQVSAPVRTDFGLHLIKLLGIEAPEVPTFASLKDKLTRE 380

Query: 405 LRNRKYDEELQTWLRQIRDEAY 426
           L+ ++ ++      +Q+ D ++
Sbjct: 381 LKTQQVEQRFVEATKQLEDASF 402



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 10/169 (5%)

Query: 153 ERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLR 212
           +++ V +++++     ++  +  SE+ R A+ILI   +        +A  K+ ++  +L 
Sbjct: 241 DQVSVKDEDLQAAYQKEIANL--SEQRRAAHILIEVNDKVTE---AQAKAKIEEIQARLA 295

Query: 213 QGADFGQMAIANSASE-NALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFI 271
           +G  F  +A   S    +A  GG++G+   G   P+F K L ++   +++ P+R   G  
Sbjct: 296 KGESFEALAKEFSQDPGSANNGGDLGYAGPGVYDPEFEKALYALNKDQVSAPVRTDFGLH 355

Query: 272 ILKL---EEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYD 317
           ++KL   E     +   L+D++  R +  +  E R   AT+QL +  ++
Sbjct: 356 LIKLLGIEAPEVPTFASLKDKL-TRELKTQQVEQRFVEATKQLEDASFE 403



 Score = 25.0 bits (53), Expect = 0.007
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 17/148 (11%)

Query: 34  VAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQQVLERLIVENLQLQIGERSG 93
           + I  ND V ++Q   ++ E+Q  +AK         AL ++  +     N    +G  +G
Sbjct: 270 ILIEVNDKVTEAQAKAKIEEIQARLAKG----ESFEALAKEFSQDPGSANNGGDLG-YAG 324

Query: 94  IRITDEELNQAIGTIAQRN---------GMSLDQFRAALARDGLSFDDAREQVKREMIIS 144
             + D E  +A+  + +           G+ L +     A +  +F   ++++ RE+   
Sbjct: 325 PGVYDPEFEKALYALNKDQVSAPVRTDFGLHLIKLLGIEAPEVPTFASLKDKLTRELKTQ 384

Query: 145 RVRQRRVAERIQVSEQEVKNFLASDLGK 172
           +V QR V    Q+   E  +F ASDL +
Sbjct: 385 QVEQRFVEATKQL---EDASFEASDLAQ 409