Pairwise Alignments

Query, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

Subject, 434 a.a., survival protein surA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  289 bits (740), Expect = 1e-82
 Identities = 149/419 (35%), Positives = 255/419 (60%), Gaps = 2/419 (0%)

Query: 19  LSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQQVLER 78
           +S    AA QPLDRV   +++ +V++S++   +  V+         +P  SAL  QV+ER
Sbjct: 16  ISQPTMAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKAANQSLPSDSALRTQVIER 75

Query: 79  LIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFDDAREQVK 138
           LI+  LQLQ+ +R G+ I D +L+QAI  IA+   M++ Q +  +A +G+SF   REQ++
Sbjct: 76  LILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKIASEGISFSQYREQLR 135

Query: 139 REMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDDIQ 198
            E+ +  +++ +V  RIQVS QE+   +     +     EY++ +ILI  P    S+ ++
Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGHILIDVPNNPTSEQLE 195

Query: 199 KAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVG 258
            ++++   V ++L+ G DF + AIA+S+   ALEGG   +    ++P  FA++++    G
Sbjct: 196 ASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAKKG 255

Query: 259 EITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYDR 318
           +I  PI+   GF I+K+ + RG     + +EV  RHIL+KPS I SE   + + E+   +
Sbjct: 256 DIIGPIKTGAGFHIIKIMDARGLQTKEI-EEVRARHILLKPSPILSEDRAKAMLEQFLKQ 314

Query: 319 IKNGE-DFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQY 377
           I++GE  F +LA+ +SEDPGSA  GG+L W +P+  VPEF + + +     +++PF+T +
Sbjct: 315 IRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTH 374

Query: 378 GWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVEIKLPGADQ 436
           GWH+ ++  RR TD+T+Q    +A  ++  RK++EELQ WL ++R +AY+E+  P +++
Sbjct: 375 GWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVFQPESNR 433