Pairwise Alignments

Query, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

Subject, 629 a.a., peptidyl-prolyl cis-trans isomerse domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 37/335 (11%)

Query: 14  LGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQ 73
           LG+ +    + AA+   D++ A  D       +  ++V + QQT+  R          E+
Sbjct: 103 LGITVTPYELRAAI---DQIPAFRDASGKFDPETYKKVLKAQQTVPGR---------FEE 150

Query: 74  QVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMS-----LDQFRAALARDGL 128
            V + ++   ++  +   +G  +TD E         ++  +      LD++ AA + +  
Sbjct: 151 GVRKDMLGRKMRALV--TAGAVVTDAEARDMFTYAQEKRSIDYVLFPLDEYAAAASIEDA 208

Query: 129 SF------DDAR--EQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMS-EEY 179
           +       + AR  E  K  +   R+    +A  I + E  +  F A +     M  E  
Sbjct: 209 ALQAWYDSNKARFTEPQKVRLDFVRISAESLAAGIDIPETAIAAFYAENAASYFMQPERV 268

Query: 180 RLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWR 239
           R  +IL+  PE A+   ++KA  ++ D   Q++ G DF  +A   S   +A  GGE+GW 
Sbjct: 269 RARHILVRVPEGADEATVRKAEERIADAAAQIKAGKDFAAVAAKVSEDGSARNGGELGWF 328

Query: 240 KAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKP 299
             G++   F      +  GE++ P+R   GF ++K E      +  L DEV         
Sbjct: 329 GRGEMVKPFEDAAFGLKPGEVSAPVRSQFGFHLIKSEGHEAQRQKAL-DEVR-------- 379

Query: 300 SEIRSEAATEQLAERLYDRIKNGEDFGELAKSFSE 334
           +EIR   A E+  E+++D + N  +     KS  E
Sbjct: 380 NEIRKRLAEEKAIEKVHDSLDNALELVSAGKSVDE 414



 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 92/386 (23%), Positives = 161/386 (41%), Gaps = 56/386 (14%)

Query: 33  VVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTS----ALEQQVLERLIVENLQLQI 88
           VVA V+   ++     +      +++  R  GV         L++QVL++++ E L  Q 
Sbjct: 40  VVATVNKKPIVIRDFIREYERQVESLRTRFPGVTADELKKLGLKRQVLQQMVAETLMQQE 99

Query: 89  GERSGIRITDEELNQAIGTIAQRNGMS----LDQFRAALARDGLSFDDAREQVKREMIIS 144
            ER GI +T  EL  AI  I      S     + ++  L           E V+++M+  
Sbjct: 100 AERLGITVTPYELRAAIDQIPAFRDASGKFDPETYKKVLKAQQTVPGRFEEGVRKDMLGR 159

Query: 145 RVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDDIQKAARKV 204
           ++R    A  + V++ E ++            E+  +  +L P  E A +  I+ AA + 
Sbjct: 160 KMRALVTAGAV-VTDAEARDMFT------YAQEKRSIDYVLFPLDEYAAAASIEDAALQA 212

Query: 205 GDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPI 264
                                      +  +  + +  ++  DF ++ +      +   I
Sbjct: 213 W-------------------------YDSNKARFTEPQKVRLDFVRISAE----SLAAGI 243

Query: 265 RIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYD---RIKN 321
            IP   I     E    S  +  + V  RHIL++  E   EA   +  ER+ D   +IK 
Sbjct: 244 DIPETAIAAFYAEN-AASYFMQPERVRARHILVRVPEGADEATVRKAEERIADAAAQIKA 302

Query: 322 GEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHV 381
           G+DF  +A   SED GSA NGG+L W     +V  F +     + G V+ P ++Q+G+H+
Sbjct: 303 GKDFAAVAAKVSED-GSARNGGELGWFGRGEMVKPFEDAAFGLKPGEVSAPVRSQFGFHL 361

Query: 382 LEVLGRRATDSTEQAREQQALSVLRN 407
           ++  G        +A+ Q+AL  +RN
Sbjct: 362 IKSEG-------HEAQRQKALDEVRN 380