Pairwise Alignments

Query, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

Subject, 460 a.a., peptidyl-prolyl cis-trans isomerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 99/452 (21%), Positives = 203/452 (44%), Gaps = 54/452 (11%)

Query: 12  VLLGVALLSGAV-HAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSA 70
           V L +A+ +  V +A    +D VV +V ++ +++S +++   +      +R  G P    
Sbjct: 11  VTLVLAVFANVVTYAQDNVIDEVVWVVGDEAILKSDVEEARMDALYN-GRRFEGDPYCVI 69

Query: 71  LEQQVLERLIVENLQL---QIGERSGIRITDEELNQAIGTIAQRNGMSLDQFR--AALAR 125
            E+  +++L +   +L   ++ E   I+  D   N  I  I  +  M  + F   A   R
Sbjct: 70  PEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSKEKME-EYFNKTATQIR 128

Query: 126 DGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLAS----DLGKMQMSEEYRL 181
           + L     RE  +  + + +++Q+ V + I+V+  EV+ +        +  +    E ++
Sbjct: 129 ETL-----RENARDGLTVQKMQQKLVGD-IKVTPAEVRRYFKDLPQDSIPYIPTQVEVQI 182

Query: 182 ANILIPTPEAANSDDIQKAARKVGDVYQQLRQGA-DFGQMAIANSASE-NALEGGEMGWR 239
             +    P A    +I+   R++ D   ++ +G  DF  +A   S  + +A++GGE+ + 
Sbjct: 183 ITLQPKIPIA----EIEDVKRRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGELDFM 238

Query: 240 KAGQLPPDFAKMLSSMP-VGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 298
             G L P +A +  S+    ++++ +    G+ I++L EKRG       D V+ RHIL++
Sbjct: 239 GRGMLDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKRG-------DRVNTRHILLR 291

Query: 299 PSEIRSEAATEQLA--ERLYDRIK-NGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVP 355
           P ++  +  TE  A  + + D I+ N   F E A   S+D  +  N G +   +  + + 
Sbjct: 292 P-KVSEKELTEACARLDSIGDDIRQNKFTFDEAASVISQDKDTRNNHGLMVNTNERTGIT 350

Query: 356 EFREQMANAQQ-----------GVVTKPF---KTQYGWHVLEVLGRRATDSTEQAR---- 397
             + QM +  Q           G +++ F     + G  V  ++  +A  +  +A     
Sbjct: 351 TSKFQMQDLPQDVAKVVDKMNVGEISRAFTMINEKDGKEVCAIVKLKAKINGHKATIAED 410

Query: 398 EQQALSVLRNRKYDEELQTWLRQIRDEAYVEI 429
            Q    ++ +++ +E LQ W+   +   YV I
Sbjct: 411 YQDLKEIVMDKRREEMLQKWILNKQKHTYVRI 442