Pairwise Alignments

Query, 267 a.a., Ribosomal RNA small subunit methyltransferase A from Pseudomonas putida KT2440

Subject, 279 a.a., dimethyladenosine transferase from Synechococcus elongatus PCC 7942

 Score =  164 bits (414), Expect = 2e-45
 Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 18/270 (6%)

Query: 9   ARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKD 68
           ARKRFGQ++L    I+DRI+ A   +  + +LEIGPG+GALT+ LL +   L  VELD+D
Sbjct: 3   ARKRFGQHWLRSEAILDRIVAAAELRPSDRVLEIGPGRGALTQRLLAAVDGLVAVELDRD 62

Query: 69  LVPILQHKFADRSNFRLHQGDALKFDFN-QLGVPPR---SLKVVGNLPYNISTPLIFHLL 124
           L+  LQ +F    NF L +GD L+ D+   +   PR     KVV N+PYNI+ P++  LL
Sbjct: 63  LIGQLQQRFGQAENFCLLEGDILQLDWTAAIADRPRFANPSKVVANIPYNITGPILQSLL 122

Query: 125 SHAGLIRDMHF-----MLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFN 179
                 R   F     ++Q+EV +R+ A PG   +G LS+ VQY    E +  V P +F+
Sbjct: 123 GTIAQPRRPAFERLVLLVQQEVADRLCATPGQRAYGALSVRVQYLASCERVCAVPPKSFS 182

Query: 180 PPPKVDSAIVRLVPHEVLPFP--AKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEA 237
           PPPKV S ++ L P    P+P    +   LE+++ + F+ +RK LRN +K L  S  IEA
Sbjct: 183 PPPKVQSTVICLKPR---PWPQVCNNPGRLEKLLNQGFSAKRKMLRNNLKSLYSSEQIEA 239

Query: 238 AGVDGSLRP----EQLDLAAFVRLADQLAD 263
           A     + P    E L +  ++ L   L D
Sbjct: 240 AFAAHQIAPEARAETLSIDQWIGLCTDLGD 269