Pairwise Alignments

Query, 267 a.a., Ribosomal RNA small subunit methyltransferase A from Pseudomonas putida KT2440

Subject, 274 a.a., dimethyladenosine transferase from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 1e-38
 Identities = 95/258 (36%), Positives = 133/258 (51%), Gaps = 9/258 (3%)

Query: 9   ARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDV-VELDK 67
           A+K  GQNFL D  +  +I R         ++E+GPG G LT  +L  GA+  V +E D 
Sbjct: 21  AKKALGQNFLLDLNLTQKIARTAGPLEDVTVIEVGPGPGGLTRAILALGAKKVVAIERDS 80

Query: 68  DLVPILQHKFADR-SNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIFHLLSH 126
             +P L    A       + + DALK DF  L   P  ++++ NLPYN+ T L+ + L  
Sbjct: 81  RCLPALAEIGAHYPGRLDIIEDDALKVDFEALADGP--VRIIANLPYNVGTQLLVNWLLP 138

Query: 127 A---GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
                  + M  M Q+EV  R+ AG     +GRL ++  +  +    F+V P AF PPPK
Sbjct: 139 GLWPPFWQSMTLMFQREVGLRIVAGADDDHYGRLGVLCGWRTKARLAFDVPPQAFTPPPK 198

Query: 184 VDSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEAAGVDGS 243
           V S +V L P E  P P     +LE+V + AF QRRK LR ++K L   A +  AG+D  
Sbjct: 199 VTSTVVHLEPVEA-PIPCSP-AVLEKVTQAAFGQRRKMLRQSLKPLGGEALLAKAGIDPQ 256

Query: 244 LRPEQLDLAAFVRLADQL 261
            R E L +  F RLA+ L
Sbjct: 257 RRAETLTVEEFCRLANCL 274