Pairwise Alignments

Query, 267 a.a., Ribosomal RNA small subunit methyltransferase A from Pseudomonas putida KT2440

Subject, 273 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Klebsiella michiganensis M5al

 Score =  245 bits (626), Expect = 6e-70
 Identities = 129/259 (49%), Positives = 173/259 (66%), Gaps = 3/259 (1%)

Query: 7   HRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELD 66
           H ARKRFGQNFL+D  +ID I+ AIN + G+ ++EIGPG  ALTE +     QL V+ELD
Sbjct: 9   HLARKRFGQNFLNDQFVIDSIVSAINPQKGQAIVEIGPGLAALTEPVGERLDQLTVIELD 68

Query: 67  KDLVPILQ-HKFADRSNFRLHQGDALKFDFNQLGVPP-RSLKVVGNLPYNISTPLIFHLL 124
           +DL   LQ H F       ++Q DA+  +F +L     + L+V GNLPYNISTPL+FHL 
Sbjct: 69  RDLAARLQTHPFLG-PKLTIYQQDAMTMNFGELSQSMGQPLRVFGNLPYNISTPLMFHLF 127

Query: 125 SHAGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKV 184
           S+   I DMHFMLQKEVV R+ AGP    +GRLS+M QY+C++  +  V P AF PPPKV
Sbjct: 128 SYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPSAFTPPPKV 187

Query: 185 DSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEAAGVDGSL 244
           DSA+VRLVP+  LP P K+  +L R+  EAFNQRRKT+RN++  L     +   G+D + 
Sbjct: 188 DSAVVRLVPYRTLPHPVKEVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAK 247

Query: 245 RPEQLDLAAFVRLADQLAD 263
           R E + +A + +LA+ L++
Sbjct: 248 RAENISVAQYCQLANWLSE 266