Pairwise Alignments

Query, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  494 bits (1273), Expect = e-143
 Identities = 281/696 (40%), Positives = 409/696 (58%), Gaps = 10/696 (1%)

Query: 539  LVVAVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYD 598
            LV    + + L+++Q QL + EE++ +     P G++    ++  +   N+ F  + G  
Sbjct: 183  LVSLALEHAALRQSQAQLHSLEERYLRLLEFCPTGII-HYDTELHITYSNQQFANIIGVP 241

Query: 599  LNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRS-DGQIRLCELSARPLP 657
            L    D   LD+    D      L   L  +G    F    R S  G+     L A P+ 
Sbjct: 242  LERLQD---LDMAKLQDQRPLPALAAVL--EGRTGRFEGEYRASLSGRQLWVSLVAAPVL 296

Query: 658  ITGVDCM--LTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEIT 715
              G   +  + I  D TER   + +L+  +   E +   ++ITD +  I  VN  F+  T
Sbjct: 297  DQGGQLLGGIAIVEDATERKRAELQLRQLSRAVEQSPATIVITDTNGVIEYVNPKFTRTT 356

Query: 716  GYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISA 775
            GYS  EA+G  P +L SG+     Y  +W  + + G W+G  +N+R+NGELY    TIS 
Sbjct: 357  GYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYWEHATISP 416

Query: 776  VRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVS 835
            + + ++ ITHFVAV  DI+  +  + ++   A+ D LTGLPNRTL  +R+   L  A+  
Sbjct: 417  ITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAERE 476

Query: 836  NRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLP 895
                A+LF+DLD FK +NDSLGH  GD LL+ +AQRLK  VRD DTV+RLGGDEF+++L 
Sbjct: 477  QETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVVLA 536

Query: 896  GLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMY 955
                   AS +A K++     PF    H+   + SIGISL+P D  D  +L++NAD AMY
Sbjct: 537  DAQLDG-ASQVARKIIDRVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLKNADTAMY 595

Query: 956  RSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEA 1015
            ++K  GRN  + +T ++   A ER+ LE+ LR+AVER E  L +QP++ + +  ++GAEA
Sbjct: 596  QAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSGRVIGAEA 655

Query: 1016 LIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLA 1075
            L+RW HP  G VPP  FI +AE++G I  +GDWVL +ACRQ +AW++   P  P+++NL+
Sbjct: 656  LVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAIPVAVNLS 715

Query: 1076 GAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAID 1135
              QLR   L   + +LL+   L++  L+LE+TE  +M  AE  +  L +L ++GV L+ID
Sbjct: 716  AVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDEMGVMLSID 775

Query: 1136 DFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVE 1195
            DFGTGYSSLSYLKR P+D LKID+SF+R +  D  D AIA AII++G S++L +IAEGVE
Sbjct: 776  DFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLRVIAEGVE 835

Query: 1196 NQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFLR 1231
               Q   L   GC++ QG+    P+P +EFAA   R
Sbjct: 836  TAEQLEILHRHGCDEAQGFHFGRPMPADEFAAYLAR 871