Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 596 a.a., acyl-CoA dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  548 bits (1413), Expect = e-160
 Identities = 293/598 (48%), Positives = 383/598 (64%), Gaps = 8/598 (1%)

Query: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60
           M  Y+APLRD +F+L+E+ ++ +Q   L G  E+ D +   A+L+     +   + PL+ 
Sbjct: 1   MPVYQAPLRDYQFILDEMLHIYQQ-DALKGFDEI-DPELVDAILQGMADFSTEVMLPLNS 58

Query: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120
             D +GC    G V TP GF +AY  + + GW  +  DP FGG G+P+ +   V EM  +
Sbjct: 59  IGDVQGCKLVEGNVVTPEGFADAYQQFVDNGWPTLTCDPAFGGQGLPEVVGIFVTEMQTS 118

Query: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180
           +++AF +YP LT GA  +I+AH SEALK+KYLP + +G W G+M LTE HAGTDL ++RT
Sbjct: 119 TNMAFAMYPGLTHGAYSAIHAHGSEALKQKYLPKLVSGEWTGTMNLTESHAGTDLALLRT 178

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240
           KA P ADG + ++G KIFI+ G+H  T+NI+HLVLA+LPDAP G KGISLF VPK LVN 
Sbjct: 179 KAVPAADGYFAITGEKIFISSGDHPFTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNS 238

Query: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300
           DGSLG  N      +EHKMGI  ++TCVM FD A+G +VGEP++GL AMFTMMN  RLGV
Sbjct: 239 DGSLGQANSLYASGLEHKMGIHGNSTCVMVFDGALGELVGEPHQGLRAMFTMMNQARLGV 298

Query: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIEG 360
           G+QGL  +E +YQNA+ YA+DRLQSRA +G +A +KAADPI+VH DVRRMLL+ KA  EG
Sbjct: 299 GMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRMLLSQKAFNEG 358

Query: 361 GRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGH 420
            RA     A+ LD A+   D +  K + +L AL TPV K F+T+ G    V  QQVFGGH
Sbjct: 359 ARALVGQQALWLDEAERHSDPAKAKAASQLAALFTPVVKGFITNRGFNACVDAQQVFGGH 418

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITGAG 480
           GYI EWG EQ VRD RI  IYEGTNGIQALDL+GRK+++  GA  + +S  + +FI   G
Sbjct: 419 GYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSTLVTEFIQSQG 478

Query: 481 --SELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538
             +++  +   L      L   + ++   A  NP+ IGAAS+ YL  FG  A  +MWA M
Sbjct: 479 KDAQMQPYVSGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGITALAWMWARM 538

Query: 539 ARAALA----GEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592
           A  AL     G  +  FY  KL TA FY A    +  SL   ++  SE L  LD   F
Sbjct: 539 ANIALTALDNGTEEVGFYQAKLKTADFYMAYWAVQSRSLRKQLEQASEMLTQLDETIF 596