Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

 Score =  618 bits (1593), Expect = 0.0
 Identities = 329/600 (54%), Positives = 412/600 (68%), Gaps = 23/600 (3%)

Query: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60
           M  Y+APL DMRF+L +VF+    W+QLP +AE+VD DTA A+LEEA K++A+ I PL+R
Sbjct: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60

Query: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120
           A DE+G    +  V TP G+   Y+ Y++GGWVG+ G+P FGGMGMPK +   V+EM  +
Sbjct: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120

Query: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180
           +  AF LY  LTAGA L INAH SE LK+ YLP +Y+G WAG+M +TEP AG+DL  IRT
Sbjct: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240
           +A PQ DGSY +SG+KIFITGG+HDLTEN+IHLVLAKLP++    KGISLFLVPK  VN+
Sbjct: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPES----KGISLFLVPKITVNK 236

Query: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300
           DG LG  N  + GSIEHKMG++ SATCVMNFDEA GY++GEPN+GL  MFTMMNYERL +
Sbjct: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296

Query: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAG-PQAKDKAADPIIVHPDVRRMLLTMKALIE 359
           GIQGL SA+ +YQ A +YA++R Q  A  G P   D  +DPIIVH DVRRMLLT++A+ E
Sbjct: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD--SDPIIVHGDVRRMLLTIRAMTE 354

Query: 360 GGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGG 419
            GRA S +   QLD AKY++D  V+ ++   V LLTPVAKAFLTD GL+  +  QQVFGG
Sbjct: 355 AGRALSVFTGKQLDLAKYAQD-DVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGG 413

Query: 420 HGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITGA 479
           HGYIRE G EQLVRD RI QIYEGTNGIQA+D +GRKV     A  K F  E++      
Sbjct: 414 HGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELK------ 467

Query: 480 GSELDEFAKPLG-------ASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYG 532
            +++ EF +  G       A LD L  + E V +Q    P  I A +V++L AFGY  YG
Sbjct: 468 -AQMREFTQVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYG 526

Query: 533 YMWALMARAALAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592
           + W  M     + E D  F   K   A+FYF +LLP+ D  +A V+AG  S   + AE F
Sbjct: 527 FYWLAMLDKVPSAE-DQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585