Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 294 a.a., RarD protein from Pseudomonas syringae pv. syringae B728a

 Score =  125 bits (313), Expect = 2e-33
 Identities = 80/288 (27%), Positives = 144/288 (50%), Gaps = 19/288 (6%)

Query: 8   RGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHPGWWRE-- 65
           +G +L + A  ++G+   Y   +  +   EI   R+L +    +L +LV    G W+   
Sbjct: 3   KGVVLSVLASTLFGVMYFYTSLMTPLDGEEIFGWRMLLTVPCATLFMLV---SGDWQRVR 59

Query: 66  -----LRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
                LR  P  +  L LS  L+    L ++W+  +GR LE SLGY++ PL  +L G ++
Sbjct: 60  EVAVRLRQQPLLIFALLLSSVLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRVV 119

Query: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
            GE L  LQ +A   A +GV  ++W++GS  W +L++A  +  Y ++R++     L GL 
Sbjct: 120 YGEHLSYLQKVAAVFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLGGLW 179

Query: 181 VETWMLVPLALGWLLL--HPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLP 238
            +  +++P+ L W +   HP A+      Y     L +   G ++   LV +  A+R LP
Sbjct: 180 FDMLLMLPIGL-WFIAHGHPQAIQQAPLLY-----LLIPLLGVISASALVSYILASRLLP 233

Query: 239 YTTLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVD 286
           ++  G L Y+ P ++L+   +L  E +S      ++ IW  + +  ++
Sbjct: 234 FSLFGLLSYVEP-ILLVGVALLLGESISRDEWLTYLPIWLAVVVLMIE 280