Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 300 a.a., RarD family membrane permease from Caulobacter crescentus NA1000

 Score =  208 bits (529), Expect = 1e-58
 Identities = 121/287 (42%), Positives = 170/287 (59%), Gaps = 10/287 (3%)

Query: 7   RRGYILGLSAYIIWGLFPLYFKAIQS--VPAVEIIVHRVLWSALFGSLLLLVWKHPGWWR 64
           R  Y  G+  Y++WG  PLYF  +    V + E+I HR LWS L+   L+L+ +  G   
Sbjct: 10  RSAYAAGVGCYLLWGFLPLYFHLLAKLGVTSWEMIAHRSLWSVLWALGLVLIARQVGQVA 69

Query: 65  ELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGER 124
           ++   P+ LG+LAL+   I  NW  YV++VN G ++EASLGYYINPL+N+  G L+  ER
Sbjct: 70  QVLRQPKTLGVLALTTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAAGALLFRER 129

Query: 125 LRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLVVE-T 183
           +     +A+G+AAVGVA Q   +G LP VSL LAL+F  Y ++RKQ    A  GL +E  
Sbjct: 130 MSTEGKVAIGLAAVGVAIQTVALGHLPIVSLGLALTFCVYAILRKQVKADAQTGLFIECA 189

Query: 184 WMLVP-LALGWLLLHPTAMSAQGAFYTSSEALWLMA-AGPVTLVPLVCFNAAARHLPYTT 241
           ++ +P LA  W L      S QG F   +    L+A AGP T+VPL  F  +AR LP + 
Sbjct: 190 YLALPGLAYVWFL----QSSGQGHFGDGASVTTLLALAGPATVVPLALFAWSARRLPLSA 245

Query: 242 LGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAW 288
           +GFLQ++APT+  L  V  F E  +     +F+FIW G+A ++  AW
Sbjct: 246 VGFLQFIAPTIQFLLGVA-FGEPFTPLRALSFVFIWLGVATFAYGAW 291