Pairwise Alignments

Query, 645 a.a., CBS domain protein from Pseudomonas putida KT2440

Subject, 620 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  241 bits (616), Expect = 5e-68
 Identities = 180/631 (28%), Positives = 299/631 (47%), Gaps = 26/631 (4%)

Query: 19  IQGTLQFLQRFPPFNQMEHSHLAFLVEQCQLRFYACGESIVKPADGPVEHFYIVKQGRVV 78
           +Q  +QFL    PF+      +    +   + +Y+     V+  D      Y+V+ G   
Sbjct: 6   LQPVVQFLTSTAPFDTFSEEFIRRCAKAVIIGYYSKASGFVQ-FDAEAPKLYLVRSGAF- 63

Query: 79  GERQHLAKPGVETTFEITSGECFPLAALLGERATRTEHLAGEDTFCLQLNKAAFIRVFSM 138
                +  P       +  GE F  + LL            ED+      +A F ++ S 
Sbjct: 64  ----EVRDPEGVLLDRVAEGEFFGFSTLLSGEKVVNRVAILEDSLVYHFPQALFDQLRSE 119

Query: 139 SDVFRDFALRGVSSLLDQVNQQVRQRAVETLGTQYSLNTPLGELAMRHPVVCSAHTPLRE 198
           S  F  F  R  +  L     + R +A + L T   ++T    L    P+   AH  + +
Sbjct: 120 SRHFDKFFTRAFAKRL---RHEARFKAKD-LATTSRIST----LMSSSPITIDAHATVTQ 171

Query: 199 AVRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVATVDTDLGAAIDRHMTAKPFYLPPQ 258
           A  LM   +V S++V D  +  +GI T +DLR  V     D   A+ + MT  P  +   
Sbjct: 172 AALLMRNSRVSSLLVTDNHKL-VGILTDKDLRNRVLASGLDGQIAVHQAMTTSPISISSN 230

Query: 259 ASAFDAAMAMTERHIAHVCLVENG-----RLCGVVSERDLFSLQRVDLVHLARTIRHAPR 313
           A  F+A + M+E +I H+ +++       +  G+V+  D+   Q    + L   I     
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDILRGQGSQPLLLIGEIERQRD 290

Query: 314 LDTLVSLRGEISQLVERMLAHGASSTQITQIITLLNDHTVCRVIELALAERGDPGVPFSW 373
           L +L+S+  +I  L++ +++  A + +I +++T + D    R+I L     G+  + F W
Sbjct: 291 LASLISVSKQIPVLLQNLISADARAEEIGRVLTSVTDALTRRLIVLNQQILGEAPMAFCW 350

Query: 374 LCFGSEGRREQTLHTDQDNGILF-EAVDSAEADAIRARLLPLAQYINQCLAQCGFTLCMG 432
           L FGS+GR++Q   +DQDNG+L  E +D    D  +     L   +   L QCG+  C G
Sbjct: 351 LTFGSQGRQDQAACSDQDNGLLVAEEMD----DFAKGYFDALTHAVCAGLDQCGYMFCPG 406

Query: 433 NVMAGNPELCLSRSEWARRFAGFVREASPENLLGSSIYFDLRVVWGDEQGCEQLRQGLLA 492
           N+MA NP+  +S ++W + F  +V    P+ L+ +SI+FD+R V+G +   + L+  +LA
Sbjct: 407 NIMAQNPKWRMSLNQWQKVFEKWVITPEPKALMHASIFFDMRSVYGPQSLFDALQDKVLA 466

Query: 493 QVADNRIFQRMMADNALRQRPPVGRLREFVLTRQGNDKAATLDLKVQGLTPFVDGARLLA 552
           Q  DN IF   MA N+L + PP+G  R+FVL R G++    +DLK +G     D AR+ A
Sbjct: 467 QTKDNDIFLAGMAGNSLIESPPLGFFRKFVLERDGSE-VKGIDLKHKGNALINDIARVYA 525

Query: 553 LANGIAACNTLERLRQLVAKGVIEPLDGAAYEEAYHFIQQTRMQQHQRQIRDNLPYSNRL 612
           L+ GI   NT +R+R L+   ++   D     +A+ FI   R+     Q    L  SN L
Sbjct: 526 LSAGIREVNTAKRIRALMDANILNRKDALNLADAHEFIAHMRLSNQGYQHTQGLKISNYL 585

Query: 613 DPDSLNHLDRRILRESLRQAQRLQSSLALRY 643
            P  L+ L R  LR++ +     QS + +++
Sbjct: 586 LPGHLSSLVRHQLRDAFKVVHDAQSGMKMKF 616