Pairwise Alignments

Query, 645 a.a., CBS domain protein from Pseudomonas putida KT2440

Subject, 740 a.a., CBS domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 72.8 bits (177), Expect = 5e-17
 Identities = 120/498 (24%), Positives = 175/498 (35%), Gaps = 88/498 (17%)

Query: 25  FLQRFPPFNQMEHSHLAFLVEQCQLRFYACGESIVKPADGPVEHFYIVKQGRVVGERQHL 84
           FL+   PF+      L  +    ++ F   G  +    D    H +++++G V G     
Sbjct: 9   FLRGIAPFSDCPSGALRRVAATAEVLFVPRGGRLPAAPDDIGTHLHLIRKGMVQGP---- 64

Query: 85  AKPGVETTFEITSGECFPLAALLGERATRTEHLAGEDTFCLQLNKAAFIRVFSMSD-VFR 143
            +PG   T  +  G     A    +        A  D  C+ L + A     + +  +  
Sbjct: 65  TRPGWPGTV-LAPGAWLDDATGATDTTGTAPCTALTDVLCILLERNAVADALATTPGLVA 123

Query: 144 DFALRGVSSLLDQVNQQVRQRAVETLGTQYSLNT----PLGELAMRHPVVCSAHTPLREA 199
             A R  ++L D+   ++R+    TL  ++  +T     L  L  R     +    + EA
Sbjct: 124 LLAPRCSAALRDRAAAEMRRT---TLLARHEADTWHHTTLATLTTRPAPCVAPGDAIGEA 180

Query: 200 VRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVATVDTDLGAAIDRHMTAKPFYLPPQA 259
            R M +   GS V+V     P GI T+RDL   V     D    +   M++  F LPP+ 
Sbjct: 181 ARAMVDSG-GSAVLVVEGGCPCGIVTVRDLTARVLARGGDSAQPVGGIMSSPVFTLPPET 239

Query: 260 SAFDAAMAMTERHIAHVCLVENGRLCGVVSER---------------------------- 291
            A DA +AMT R I HV +V      G                                 
Sbjct: 240 PALDALLAMTARGIHHVAVVPETLAHGEAPHAMLHPDARCAAQEGDDGDRERGGGDGHTG 299

Query: 292 -DLFSLQRVDLVHLARTIRHAPRL----------DTLVSLRG------------------ 322
            D F  Q  D  H  R   H  R           D L+SLRG                  
Sbjct: 300 VDRFDGQGRDSTH-HRESPHDSRADDTPPCLLSSDDLLSLRGTSPAALFAALREAKGLSD 358

Query: 323 ------EISQLVERMLAHGASSTQITQIITLLNDHTVCRVIELALAERGDPGVPFSWLCF 376
                  +  L   +L  GA    +  +   L+D    R+I +A    G P VP++++ F
Sbjct: 359 LVGVATRVDALAFDLLCEGAGPEALHTVTARLHDRLALRLIHMAEETLGPPPVPYAFMTF 418

Query: 377 GSEGRREQTLHTDQDNGILF-----EAVDSAEADAIRARLL-PLAQYINQCLAQCGFTLC 430
           G   R E  L   Q  GI+F     EA  S E     AR    +A ++   LA  GF   
Sbjct: 419 GPAAREEALLRPVQRTGIVFMPPPDEA--SPETGMRAARYCRSVATFVTDGLAALGFARD 476

Query: 431 MGNVMAGNPELCLSRSEW 448
               MA  P L L    W
Sbjct: 477 PQGRMA--PALTLPLHRW 492



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 541 LTPFVDGARLLALANGIAACNTLERLRQLVAKGVIEPLDGAAYEEA 586
           L   VD  RLLA+  G+ A  T  RLR  +A+G  +P   + Y EA
Sbjct: 620 LQALVDAVRLLAVRLGVDAVGTRSRLR--LAEGQAKPDTASVYPEA 663