Pairwise Alignments

Query, 236 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

 Score =  233 bits (593), Expect = 3e-66
 Identities = 124/230 (53%), Positives = 159/230 (69%), Gaps = 2/230 (0%)

Query: 1   MSLFAWLRPSAPELDHTTRQRLARLPKPVPLGVCTLREQRWVVLDLETSGLNPNRDQVLS 60
           MS+F W     P+L    +QR+  LP P+      LR+QR VVLDLET+GL+  RD V++
Sbjct: 1   MSMF-WFNSRGPKLPPEQQQRIDELPLPLAPQTVPLRQQRLVVLDLETTGLHLKRDLVIA 59

Query: 61  IGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPSALAAGCDPAEALLDLLDFIG 120
           IGAV IEDGAID++QQFE TL R ++ T  SVLIHG+ PS LA G  PAEALL  ++F  
Sbjct: 60  IGAVVIEDGAIDYSQQFECTLCRQVKVTE-SVLIHGIAPSELANGLPPAEALLSFMEFAA 118

Query: 121 NSPVLAFHAPFDQRMLARALKESLGYRLQSPFLDIAELAPMLNPDTVLREAGLDDWVARF 180
            S +LAFHAPFDQRML RALK  LGY +   FLD+A+LAPML P+ ++   GLD W+  F
Sbjct: 119 GSVILAFHAPFDQRMLGRALKRELGYTMDHTFLDVADLAPMLFPEAMIHRGGLDHWLDYF 178

Query: 181 GLQVEERHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRK 230
            + + +RH+ASADA  TAE+ALIL  +A+R  L S  +L QRLR W+R +
Sbjct: 179 NIHIPQRHNASADAMATAEIALILLHRAQRVGLTSLDELAQRLRCWQRAR 228