Pairwise Alignments

Query, 236 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 10/189 (5%)

Query: 39  QRWVVLDLETSGLN----PNRD--QVLSIGAVAIEDGAIDFAQQFERTLHRPLQKTNASV 92
           QR VVLD ET+G+N    P+ +  +++ IGAV I +  +   + F   L         ++
Sbjct: 10  QRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLT-GRHFHVYLKPDRDIQLEAI 68

Query: 93  LIHGLGPSALAAGCDPAEALLDLLDFIGNSPVLAFHAPFDQRMLARALKESLG-YRLQSP 151
            +HG+    L    +  +   + +DFI  + ++A +APFD   +     +  G     S 
Sbjct: 69  EVHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSD 128

Query: 152 FLDIAELAPMLNPDTVLREAGLDDWVARFGLQVEER--HHASADAQVTAELALILFSQAR 209
           F  + +   M       +   LD    R+G+    R  H A  DA++ A++ L++     
Sbjct: 129 FCKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQT 188

Query: 210 RQQLDSPLQ 218
             Q  S  Q
Sbjct: 189 SLQFSSVTQ 197