Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 166 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (360), Expect = 2e-39
 Identities = 74/157 (47%), Positives = 101/157 (64%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGL 71
           V ALY  H GWL  WL+  +     A DL+QDTFVRLL R +    R PRAFL  +A+GL
Sbjct: 8   VQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFVRLLQRSERLELRAPRAFLRTIAQGL 67

Query: 72  MFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHS 131
           + DH+RR  +E+AYL  +A +PEAE P  E Q LILE L+AI R+   L  K R AFL +
Sbjct: 68  VIDHWRREEIERAYLQTIAHLPEAETPGAEAQALILELLEAIARMFEGLKPKVRRAFLLA 127

Query: 132 RLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALY 168
           + +G+ + +IAE++G+S+  V +Y+A  +  CYV  Y
Sbjct: 128 QCEGLTYKQIAEQMGISLRSVERYVADALYHCYVLRY 164