Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 166 a.a., Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 75.5 bits (184), Expect = 4e-19
 Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 18  DHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFDHFR 77
           +H   L+    R +  RQ+AEDL+ DTFVR+L  +      +PRA+L   A+ +  D +R
Sbjct: 13  EHYEELIGTWTRRLRNRQQAEDLAHDTFVRVLESDSSGV-EQPRAYLHQTARNIAVDGYR 71

Query: 78  RAALEQAYLAELALIPEAEQPSPEMQHLI--LEDLKAIDRLLGKLSSKARAAFLHSRLDG 135
           R     A   E A +  ++  S + +H +  ++   +I+R L +L +  R  F+  +++G
Sbjct: 72  REDRRGAM--EEAAVDHSQSLSGDPEHYMHAIQLADSIERALAELPANCRTVFVWQKIEG 129

Query: 136 MGHAEIAERLGVSVSRVRQYIAQGMR 161
           +  AEIAERLG+S + V +Y+ + +R
Sbjct: 130 LTQAEIAERLGLSKNMVEKYMIRTLR 155