Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (309), Expect = 1e-33
 Identities = 64/156 (41%), Positives = 99/156 (63%), Gaps = 1/156 (0%)

Query: 8   HADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAV 67
           H  ++  LY  H  WL A L++ +     A DL+QDTF R+L   Q+    +PRA+L+ V
Sbjct: 12  HLRVIEDLYAGHHSWLYATLKKKLGNAMDAADLAQDTFTRILA-SQVTAIDQPRAYLSCV 70

Query: 68  AKGLMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAA 127
           AKG++ + ++R ALE+AYL  LA +P  E PSPE++ L+LE L  ID +L  L +  + A
Sbjct: 71  AKGILINWYQRKALERAYLEALAHLPAEEVPSPELRFLVLETLHEIDAMLDTLPAPVKRA 130

Query: 128 FLHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQC 163
           FL S++ G+ + +IA++L VS+  V++Y+ Q   QC
Sbjct: 131 FLLSQIGGLKYDDIAQQLNVSLITVKRYMKQAFVQC 166