Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 177 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N1B4

 Score =  118 bits (295), Expect = 6e-32
 Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 2/162 (1%)

Query: 9   ADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVA 68
           A  +  LYR H GWL  WL++ + C   A D++ DTFV+LLG + L T +EPRA+L   A
Sbjct: 6   ASSLSELYRGHHGWLFGWLRKKLGCPDNAADMAHDTFVKLLGLDTLPTLQEPRAYLLVAA 65

Query: 69  KGLMFDHFRRAALEQAYLAEL-ALIPEAEQPSPEMQHLILEDL-KAIDRLLGKLSSKARA 126
             L+ + + R  +E+  L  +  L+ +  Q  PE    + + L K +  LL +L  K R 
Sbjct: 66  NRLLINQYHRRRVEEETLRSMVVLLDQQAQQGPEQIIAVRQLLGKVLLLLLEELDEKPRK 125

Query: 127 AFLHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALY 168
           AFL +R+DG  +AEIA  L VS S V+QY+A+ +  C+  L+
Sbjct: 126 AFLMARVDGCSYAEIARHLQVSESSVKQYLAKSLAHCHARLF 167