Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 170 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  161 bits (408), Expect = 5e-45
 Identities = 84/166 (50%), Positives = 110/166 (66%)

Query: 1   MSSAQSPHADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREP 60
           MS+  S     V  LYR+H GWL +WL+  + C + A DL+QDTF R+L RE L+  REP
Sbjct: 1   MSAVLSQSDLAVATLYREHGGWLRSWLRHKLGCAESAADLAQDTFCRILRRENLEGLREP 60

Query: 61  RAFLAAVAKGLMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKL 120
           RA+L  VA GL+ DH+RR  +E+AYL  LA  PEA  PSPE + L+LE L  I+ LL  L
Sbjct: 61  RAYLTTVAHGLVVDHWRRLEIERAYLEALAWQPEALAPSPEERALVLEALLEIEALLAAL 120

Query: 121 SSKARAAFLHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVA 166
             K R AFL ++LDG+G+ EI ERLGVS   V++Y+A+ M  C +A
Sbjct: 121 PEKVRQAFLLAQLDGLGYQEIGERLGVSERMVKKYMARAMLHCLLA 166