Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  153 bits (386), Expect = 2e-42
 Identities = 79/159 (49%), Positives = 105/159 (66%), Gaps = 1/159 (0%)

Query: 9   ADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVA 68
           +D +  LYR H GWL  WL+R + C  +A DL+QDTF+RLLGR   D   EPRA L  +A
Sbjct: 6   SDPLAHLYRAHHGWLHGWLRRQLGCSHQAADLAQDTFLRLLGRRSADLG-EPRALLTHIA 64

Query: 69  KGLMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAF 128
           KGL+ DH+RR A+EQAYL  LA +PEA+ PSPE + L+LE L  +D +L  L  + R  F
Sbjct: 65  KGLVVDHWRRRAVEQAYLEVLARLPEAQAPSPETRLLVLEALCRVDAMLAGLPPRTREIF 124

Query: 129 LHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVAL 167
           L S+LDG+ +  IAERLG S+  V++++  G   C  AL
Sbjct: 125 LLSQLDGLTYGAIAERLGTSLITVKRHMRNGFIACMAAL 163