Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  120 bits (300), Expect = 2e-32
 Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 2/160 (1%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGL 71
           V  LYR H GWL  WL++   CR  A DL+QDTF++LL   ++   REPRA+L   A  L
Sbjct: 10  VDHLYRSHHGWLFGWLRKKTGCRDHAADLTQDTFLKLLALPEMPALREPRAYLLVTANRL 69

Query: 72  MFDHFRRAALEQAYLAELALIPEAE-QPSPEMQHLILEDLKAIDRLLG-KLSSKARAAFL 129
           + +  +R+ +E+  L  L L+ E + +PSPE    + + L+ +  +L  +L  K R AFL
Sbjct: 70  LINLHQRSRVERETLQALVLLLEPDSEPSPEHIVAMRQLLRQVLLMLSEELEEKPRRAFL 129

Query: 130 HSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALYG 169
            +RL+G+ +A+IA  L VS S V+QY+A+ +  C+  LYG
Sbjct: 130 LARLEGLSYADIAAELQVSESSVKQYLAKALAHCHGRLYG 169