Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 79.0 bits (193), Expect = 4e-20
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 15  LYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFD 74
           LY  H   L  +L + +ACR+ A +L+Q+TF+R++  +  D  R PRAFL  +A  L  D
Sbjct: 10  LYLQHVAELRHYLAQRVACREVARELAQETFLRMMLSDGKDAIRNPRAFLYRIAANLAVD 69

Query: 75  HFRRAALEQAYLAELALIPE--AEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHSR 132
           H+R  A     +  L    E    +P PE      + L  +   + +L  + R  FL  +
Sbjct: 70  HYRAEAGRPREILPLEDCAEQACPRPGPEQVASARQTLARLAAAVEQLPPRCREVFLRHK 129

Query: 133 LDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALY 168
            DG   A++A   G+SV+ + +++ + + Q  + L+
Sbjct: 130 FDGCRQADLAREYGISVNAIEKHLIRALVQLRLCLH 165