Pairwise Alignments

Query, 370 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 378 a.a., membrane protein from Azospirillum brasilense Sp245

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 22/363 (6%)

Query: 7   RRWSLIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLLGDAPELREMPAGTPHLDLQQLV 66
           R W L H+W ++    FL  +++TG   +   E+  L+   P +R   AG P L    L+
Sbjct: 9   RLWFLWHSWLAMPLWAFLFFVSLTGTIAVVSTEIMWLVN--PAMRASGAGEP-LPASALI 65

Query: 67  LKAEQHRPGEVMQYFGYDEDEPNGVVAITAATASTDPNLSHTFMLDARTGEAVAMPAANG 126
             AE   PG  +    +        +A+ A  A  D   S T  ++  +G    +   N 
Sbjct: 66  AAAEAAAPGGRVSSLSWGGSH----MAVGARMAMPD-GTSSTAWVNPVSGAVQGLSTGNS 120

Query: 127 GFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLYAPFMRRLEFGTVRHKKSRR 186
            F      LH  +     G  L+  + +  + ++V+G V+Y  F +      +R +++ R
Sbjct: 121 -FQSFFRALHGWLMTFPVGWYLVTLLAIPLVGSLVTGLVVYKRFWKSFYQPRIRWRQAPR 179

Query: 187 LRWLDLHNLIGVVTLAWALTVSVTGVISALSDLVIAAWRN-DSLAAMVAPYRDAPPLVER 245
           + W DLH + G  ++ +   ++VT +   +  ++           A V   RD  P+   
Sbjct: 180 VMWGDLHRVAGTWSIWFIAVIAVTSLWFLIYMMLFHLGMGLGGGKAPVLLARDQIPVTAT 239

Query: 246 AP---ATRLLDIAEQAAPGMRPDFIAFPGTRFSSEHHYAVFMNGATHLSSHLFTPVLIDA 302
           AP      ++  A+ A P MR  ++  PGT +         + G++     L   V ++ 
Sbjct: 240 APRPDVDAIMASAKAALPDMRLRYLWLPGTAYD-----PATVAGSSGQVPLLPDYVRVNP 294

Query: 303 RTLEVTAVGDRPWYMDAMGLS----QPLHFGDYGGRPMQILWALLDVLTIIVLGSGLYLW 358
            T EV  +         + L+    + LH GD+GG P++++W    +L   ++ SG+ +W
Sbjct: 295 FTAEVILIEGGMEAASGIELTRTIMRALHTGDFGGLPVKLVWFSFGLLMTTLVFSGMMIW 354

Query: 359 WSK 361
             +
Sbjct: 355 MKR 357



 Score = 41.6 bits (96), Expect = 4e-08
 Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 31/200 (15%)

Query: 9   WSLIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLL-----GDAPELRE-----MPAGTP 58
           W  +H  +      F+ ++AVT L  + +  L HL      G AP L       + A  P
Sbjct: 182 WGDLHRVAGTWSIWFIAVIAVTSLWFLIYMMLFHLGMGLGGGKAPVLLARDQIPVTATAP 241

Query: 59  HLDLQQLVLKAEQHRPGEVMQYF-----GYDEDEPNGVVAITAATASTDPNLSHTFMLDA 113
             D+  ++  A+   P   ++Y       YD        A  A ++   P L     ++ 
Sbjct: 242 RPDVDAIMASAKAALPDMRLRYLWLPGTAYDP-------ATVAGSSGQVPLLPDYVRVNP 294

Query: 114 RTGEAV----AMPAANGGFMM--VMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLY 167
            T E +     M AA+G  +   +M  LH   F GLP KL+    G+L    + SG +++
Sbjct: 295 FTAEVILIEGGMEAASGIELTRTIMRALHTGDFGGLPVKLVWFSFGLLMTTLVFSGMMIW 354

Query: 168 APFMRRLEFGTVRHKKSRRL 187
              M+R    TV   +  RL
Sbjct: 355 ---MKRTARATVEAVRGLRL 371



 Score = 38.1 bits (87), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 183 KSRRLRWLDLHNLIGVVTLAWALTVSVTGVISALSDLVIAAWRNDSLAAMVAPYRDAPPL 242
           KSR   W   H+ + +   A+   VS+TG I+ +S  ++  W       +V P   A   
Sbjct: 5   KSRTRLWFLWHSWLAMPLWAFLFFVSLTGTIAVVSTEIM--W-------LVNPAMRASGA 55

Query: 243 VERAPATRLLDIAEQAAPGMRPDFIAFPGTRFS 275
            E  PA+ L+  AE AAPG R   +++ G+  +
Sbjct: 56  GEPLPASALIAAAEAAAPGGRVSSLSWGGSHMA 88