Pairwise Alignments

Query, 370 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 362 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 34/221 (15%)

Query: 11  LIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLLGDAPELREMPAGTPHLDLQQLVLKAE 70
           L+H W  L   L + ++ +TG    F  EL+ +L       ++P G       QL+  A+
Sbjct: 12  LLHLWLGLSSGLVVFVIGLTGAIYSFSDELKAVLYHDRLYVDIPHGAKKQSFDQLLFVAQ 71

Query: 71  QHRPGEVMQYFGYDEDEPNGVVAITAATASTDPNLSHTFM------------LDARTGEA 118
           +         FG       G+  I+       P+ ++ F             L+  T + 
Sbjct: 72  KK--------FG-------GLKKISRVEIQQSPDRTYMFRAYKAEKYFEKVYLNPYTAQI 116

Query: 119 VAMPAANGGFMMVMLRLHVDMFAG-LPGKLLLAFMGVLFIVAIVSGTVLYAPFMRRLEFG 177
           V    AN  F  V+L +H  +  G + G  ++ +  V F++ ++SG VL+ P   ++ F 
Sbjct: 117 VFHEDANKEFFNVVLSIHRTLLLGDVVGHFIIRWSVVCFVILLLSGIVLWWPKKWKINFW 176

Query: 178 TVR-----HKKSRRLRWLDLHNLIGVVTLAWALTVSVTGVI 213
             +       K++RL + DLH + G       L +S+TG++
Sbjct: 177 KQKLQVKWDAKAKRLNY-DLHQVFGFYAFLILLIISLTGLM 216



 Score = 37.4 bits (85), Expect = 6e-07
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 27/191 (14%)

Query: 192 LHNLIGVVTLAWALTVSVTGVISALSDLVIAAWRNDSLAAMVAPYRDAPPLVERAPATRL 251
           LH  +G+ +      + +TG I + SD + A   +D L      Y D P   ++    +L
Sbjct: 13  LHLWLGLSSGLVVFVIGLTGAIYSFSDELKAVLYHDRL------YVDIPHGAKKQSFDQL 66

Query: 252 LDIAEQAAPGMRPDFIAFPGTRFSSEHHYAVFMNGATHLSSHLFTPVLIDARTLEVTAVG 311
           L +A++   G++   I+    + S +  Y        + +   F  V ++  T ++    
Sbjct: 67  LFVAQKKFGGLKK--ISRVEIQQSPDRTYMF----RAYKAEKYFEKVYLNPYTAQIVFHE 120

Query: 312 D--RPWYMDAMGLSQPLHFGDYGGRPMQILWALLDVLTIIVLGSGLYLWWSKQRK----- 364
           D  + ++   + + + L  GD  G  + I W++  V  +I+L SG+ LWW K+ K     
Sbjct: 121 DANKEFFNVVLSIHRTLLLGDVVGHFI-IRWSV--VCFVILLLSGIVLWWPKKWKINFWK 177

Query: 365 -----PWEARA 370
                 W+A+A
Sbjct: 178 QKLQVKWDAKA 188