Pairwise Alignments

Query, 370 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 523 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 79/375 (21%), Positives = 157/375 (41%), Gaps = 32/375 (8%)

Query: 7   RRW-SLIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLLGDAPELREMPAGTPHLDLQQL 65
           +RW    H +  ++    +  + VTG  L+F  E++  L   P+L E+ A    L ++++
Sbjct: 17  KRWFGKWHLYLGIIAGAIVAFVGVTGSILVFQDEIDRALN--PKLFEVIAQKQKLPVEEI 74

Query: 66  VLKAEQHRPGEVMQYFGYDE-DEPNGVVAITAATASTDPNLSHTFMLDARTGEAVAMPAA 124
           V   +++ P   + Y   +    PN   ++       +     TF ++  TG+       
Sbjct: 75  VPLIKKNYPRLKIDYLMLNNFKNPNEAYSVLNLKTGGE-----TF-INPYTGKTTGKRIH 128

Query: 125 NGGFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLYAP--FMRRLEFGTVRHK 182
              F+ ++  LH  +   + G+ +     +  ++  +SG  L+ P  + +     TVR  
Sbjct: 129 TSSFIHIVTELHRTLLIPVAGRYICGLASLCLLILTISGLRLWIPKKWKQLKSVLTVRFS 188

Query: 183 KSRRLRWLDLHNLIGVVTLAWALTVSVTGVISALSDLVIAAWRNDS----------LAAM 232
            S + +  D HN +G  +      +S+TG     S L+I      S          L A 
Sbjct: 189 GSLKRQNYDWHNSLGFYSSPIVAILSLTGFSITFSTLIIPLLFVLSGKSPQGVAKLLGAK 248

Query: 233 VAPYRDAPPLVERAPATRLLDIAEQAAPGMRPDFIAFPGTRFSSEHHYAVFMNGATHLSS 292
            A +  A PL    P  +++  A++  P      IAFP  +  + +   V       +  
Sbjct: 249 SAWHAQAVPL----PLKQVVAAAKEKMPNGYIGGIAFPADKMGT-YRLDVVSGNLPKVGK 303

Query: 293 HLFTPVLIDARTLEV--TAVGDRPWYMDA-MGLSQPLHFGDYGGRPMQILWALLDVLTII 349
                +++D  T +V   +  D P   +A +    P+H+G +GGRP Q++  +  ++ + 
Sbjct: 304 R--EMLIVDQYTGKVLLNSRKDFPNVGNAYLSWLTPIHYGSFGGRPTQVIAIIAGLIPLA 361

Query: 350 VLGSGLYLWWSKQRK 364
           +  +G  +WW + +K
Sbjct: 362 LFITGFIIWWPRYKK 376



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 19/134 (14%)

Query: 60  LDLQQLVLKAEQHRPGEVMQYFGYDEDEPNGVVAITAATASTDPNLSHTFML--DARTGE 117
           L L+Q+V  A++  P   +    +  D+  G   +   + +  P +    ML  D  TG+
Sbjct: 258 LPLKQVVAAAKEKMPNGYIGGIAFPADKM-GTYRLDVVSGNL-PKVGKREMLIVDQYTGK 315

Query: 118 AVA-----MPAANGGFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLYAPFMR 172
            +       P     ++  +  +H   F G P +          ++AI++G +  A F+ 
Sbjct: 316 VLLNSRKDFPNVGNAYLSWLTPIHYGSFGGRPTQ----------VIAIIAGLIPLALFIT 365

Query: 173 RLEFGTVRHKKSRR 186
                  R+KK +R
Sbjct: 366 GFIIWWPRYKKQKR 379