Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  350 bits (899), Expect = e-100
 Identities = 214/592 (36%), Positives = 320/592 (54%), Gaps = 24/592 (4%)

Query: 312 QSDEIAFAGELAD---QFAQVITNHKRRAAASALHLFQRAVEQSASAFLLVNRD-GRVEY 367
           Q   +  +G L D   Q AQV         A A H        S  +  +   D GR   
Sbjct: 136 QGQPVRLSGTLMDITQQCAQVALEASEEKFAKAFH-------SSPDSITITEIDSGRYVE 188

Query: 368 VNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEP 427
           VN  F+ +T +S  EV GR   E+    +  +           G     E   R K+  P
Sbjct: 189 VNDGFSRLTGFSAHEVLGRTAHEVGIWTDTLQREHMLEELRQKGRVHHREMDGRDKHGAP 248

Query: 428 YWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLD 487
               +S+  +  +N      +    D+   K AQ +I+ LAY D LT L NR   +  L 
Sbjct: 249 LVLDISVEFITLNNTACL--LMNARDIGALKNAQAQIQHLAYHDPLTGLPNRALLLDRLS 306

Query: 488 ERFARDGESSM--CLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFA 545
           ++ +     ++   LL +D+D+FK INDSLGH  GD +L  +A RL  S+     +AR  
Sbjct: 307 QQVSLLQHQNLRGALLFLDLDHFKHINDSLGHPVGDSVLSIIAARLEASVRQEDTVARLG 366

Query: 546 SNEFAVLL------DDTSLEDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLHGV 599
            +EF VL+       D      + +A  L   L +PMF+D   + VT S+G+   P  G+
Sbjct: 367 GDEFVVLICGLEGSQDEVTRQVRELADNLRNLLAEPMFLDGHRLQVTPSIGVVLIPDDGL 426

Query: 600 DPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFYQP 659
            PA L+K A +AL++AK  G++  Q F   +    S +L +EN+LR ALT+NE  + +Q 
Sbjct: 427 TPADLLKRADIALYRAKDCGRNASQFFHVSMQQAVSQRLRLENDLRLALTRNEFHLHFQA 486

Query: 660 KLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMSQQLR 719
           ++  R+  + G EALLRW HPE G++ PDQF+ + EE+G+I+ +G  ++ +AC     L 
Sbjct: 487 QVDCRNEYITGAEALLRWQHPEYGLLAPDQFVQILEESGMILEVGSHILNEACKTGGLLL 546

Query: 720 KAGL---GNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLLLEASEDT 776
           + GL       + +N+SP+QF   D +  +   L    LP  +L+LE+TEG++++  +DT
Sbjct: 547 RQGLIPENRFLMGVNISPRQFLQHDFIERVERSLTLHQLPASMLKLEITEGIVIQNLDDT 606

Query: 777 HRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSAV 836
             ++  LKALG++ AMDDFGTGYSSL+YLK+ P+D LKID+SF+ +  ++ +D EI  A+
Sbjct: 607 ILKMLSLKALGVSFAMDDFGTGYSSLTYLKRLPVDTLKIDQSFVQDATNDPNDAEIIRAI 666

Query: 837 VAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELAERLK 888
           VAMA +L L V+AEG+ET EQLAFL +  C   QGYLF  P+PG +    L+
Sbjct: 667 VAMAQSLNLNVIAEGVETSEQLAFLEKVGCYTYQGYLFSEPLPGPQFESLLE 718