Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  394 bits (1013), Expect = e-113
 Identities = 225/588 (38%), Positives = 345/588 (58%), Gaps = 17/588 (2%)

Query: 302 LEQSGQPRAWQSDEIAFAGELADQFAQVITNHKRRAAASALHLFQRAVEQSASAFLLVNR 361
           +E S  P  WQ  + A+   L D  +   T  +       L L Q A E S ++ L+ + 
Sbjct: 327 VEVSIVPIPWQQSK-AYLALLTDITSLQQTQQR-------LKLLQEATENSPASILITSA 378

Query: 362 DGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQGEFKSR 421
           +G +EYVNP+F  +T Y  DEV G+    L +         D   ++  G +W+GE  +R
Sbjct: 379 EGIIEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGETWRGELYNR 438

Query: 422 RKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPA 481
           RK  E +W + SIS V     ++ H++ + ED+T+ K  ++ ++  A  D+LT+L NR  
Sbjct: 439 RKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRSL 498

Query: 482 FIRSLDERFARDGESS--MCLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGG 539
            +  L +  A    S+  + ++L+D+D FK IND+LGH  GD LL  +A+RLR  L    
Sbjct: 499 ALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPREI 558

Query: 540 ILARFASNEFAVLL----DDTSLEDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAP 595
            ++R   +EF ++     ++  LE    ++QQLL  + +P+ ++ + + +TAS+G+AC P
Sbjct: 559 TISRLGGDEFLIICPAVKENIHLEK---LSQQLLKIISQPITIEAEELVITASIGVACYP 615

Query: 596 LHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDV 655
             GV P  LM+NA  A++ AK NG +  Q+F   +NAEA  ++ +E +LR AL Q +L V
Sbjct: 616 NDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLRHALEQYQLKV 675

Query: 656 FYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMS 715
           FYQP + L+   ++GLEAL RW+ PE G I PD+FI +AEETGLIIP+G  V+ QAC   
Sbjct: 676 FYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDV 735

Query: 716 QQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLLLEASED 775
              ++       VA+NLSP+Q          + IL+     P+ L+LE+TE +LL+ +  
Sbjct: 736 AIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDNTST 795

Query: 776 THRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSA 835
             + LD L   G+ LA+DDFGTGYS+LSYL+++P   LK+D+SF+ +IP + +   +   
Sbjct: 796 IAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKT 855

Query: 836 VVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGREL 883
           +VAMAH L ++ VAEG+ET EQ+ FL+   C+ GQGY F RP+P  E+
Sbjct: 856 IVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEI 903