Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  365 bits (936), Expect = e-105
 Identities = 214/603 (35%), Positives = 335/603 (55%), Gaps = 17/603 (2%)

Query: 291 RVDGQVIGVLCLEQSGQPRAWQSDEIAFAGELADQFAQVITNHKRRAAASALHLFQRAVE 350
           R DG  I +   E +   R   ++ + + G + D  AQ       R +   + L  +   
Sbjct: 245 RCDGHTIWIT--ENARCVRGPDNEVLYYEGTVEDITAQ-------RQSQETMRLLGKVFT 295

Query: 351 QSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAM 410
             A   +L+ RD  V  VNP+F A+T     +++GR      +  + ++ L    + +  
Sbjct: 296 SIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDR 355

Query: 411 GNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLAYT 470
              W+GE    R+   PY G+++++ V     E THY+    D+T+ K  ++ I   A  
Sbjct: 356 AGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANF 415

Query: 471 DNLTNLGNRPAFIRSLDERF--ARDGESSMCLLLVDIDNFKRINDSLGHQTGDKLLISLA 528
           D LT+L NR   +  L++    A+     +C++ +D+D FK+INDS GH  GD++L   A
Sbjct: 416 DMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTA 475

Query: 529 RRLRNSLHSGGILARFASNEFAVLLDDTSLED---GQGVAQQLLCTLDKPMFVDNQLINV 585
           RRLRN +     + R   +EF V+L  +++ED   G  +A+++L +L +P  +    +  
Sbjct: 476 RRLRNCVRISDSVGRLGGDEFIVIL--SNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFC 533

Query: 586 TASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLR 645
             SVG+   P HG     L++NA +A++ AK  G+ +  +FT  +   +   L +E++LR
Sbjct: 534 IPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLR 593

Query: 646 RALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGK 705
            AL ++E ++ +QPK+      L+G EAL+RW HPE+G+I P  FI +AEE+GLI+PIG+
Sbjct: 594 HALARDEFELHFQPKV-RADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGR 652

Query: 706 WVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELT 765
           W +R+AC      R  GL    V++N+SP+QF D  LV ++  IL E  L P  L+LE+T
Sbjct: 653 WTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEIT 712

Query: 766 EGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPD 825
           E ++    E     L  LK LG+TL++DDFGTGYSSL+YLK FPID LKID++F+ ++  
Sbjct: 713 ETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLH 772

Query: 826 NQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELAE 885
           +  D  I S ++A+A NL   VVAEG+E  EQ  FL    C   QG+L+ RP+P  E   
Sbjct: 773 SGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTT 832

Query: 886 RLK 888
            L+
Sbjct: 833 FLR 835