Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  392 bits (1006), Expect = e-113
 Identities = 219/603 (36%), Positives = 351/603 (58%), Gaps = 11/603 (1%)

Query: 290 IRVDGQVIGVLCLEQSGQPRAWQSDEIAFAGE-LADQFAQVITNHKRRAAASALHLFQRA 348
           +R  G+V+ VLCL   G+     S  ++ A E L  +  + I   + +   S + L   A
Sbjct: 271 LRARGEVVAVLCLRGHGEA---PSPALSRALEALGPRLGEAIVYERGQ---SLMRLQSAA 324

Query: 349 VEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSL 408
           +  +A+A ++ + +GRVE+VN ++  ++ Y  D++ G     L      +    ++  +L
Sbjct: 325 IAAAANAIVITDGEGRVEWVNEAYHLLSGYERDQIIGTLPAVLAGPSAANPTAIEAWPTL 384

Query: 409 AMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLA 468
             G  W+GE     ++   Y    +I+ +   +  L+H + + EDVT  K A++RI  L+
Sbjct: 385 RAGQVWRGEIHETHRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLS 444

Query: 469 YTDNLTNLGNRPAFIRSLDERF--ARDGESSMCLLLVDIDNFKRINDSLGHQTGDKLLIS 526
             D LT L NR  F   L +    AR G   + ++ +D+D F  +ND+LGH  GD LL++
Sbjct: 445 NYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMT 504

Query: 527 LARRLRNSLHSGGILARFASNEFAVLLDD-TSLEDGQGVAQQLLCTLDKPMFVDNQLINV 585
           +A R+  +      +AR   +EFA++    TS +    +A++L+  +  P+ +  + + +
Sbjct: 505 IASRINAAAEEADTVARVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVI 564

Query: 586 TASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLR 645
            A+VG+A  P  G DP +LMKNA +A+++A  +G      F+  +NAEA+ +L +E +LR
Sbjct: 565 GANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSGDDSCCFFSNEMNAEAAVRLSLEEDLR 624

Query: 646 RALTQ-NELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIG 704
           RAL   ++L + YQ + C+ SGR +G EAL RW HP  G I P +FI VAE++GLI+ +G
Sbjct: 625 RALDSGDQLFLHYQLQFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALG 684

Query: 705 KWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELEL 764
            WV+  A     + R AG G L +A+N+S  QF    LV  ++ +L +  +PP  LELEL
Sbjct: 685 DWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELEL 744

Query: 765 TEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIP 824
           TE +L++ ++    QL  L   G+ L++DDFGTGYSSL YLK F +D LK+D+SF+ ++ 
Sbjct: 745 TESMLMQDADQAVAQLTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVT 804

Query: 825 DNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELA 884
           ++ +D  I  A++ + H+L L+V+AEG+ETPEQ+A+LRR  CDV QGYL   P PG  +A
Sbjct: 805 EDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGETVA 864

Query: 885 ERL 887
            RL
Sbjct: 865 RRL 867