Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  394 bits (1011), Expect = e-113
 Identities = 236/662 (35%), Positives = 371/662 (56%), Gaps = 36/662 (5%)

Query: 238 QPEAIDASRFPDYLDALHASRAIDAHNAGHDPRTRALAQSMRPENKAMLDA-SIRVDGQV 296
           QP+ + +     + D L  +R I A +    P T  +  +   ++ A+LDA  I +D  V
Sbjct: 72  QPDLVISDIVMPHRDGLSLAREIKAQS----PATPIVIITSHSDSGALLDAIEIGIDRYV 127

Query: 297 IGVLCLEQSGQPRAWQSDEIAFAGELADQFAQVITNHKRRAAASALHLFQRAVEQSASAF 356
           +  L           ++  +  A     + A++ + H  R A +  H        S+ A 
Sbjct: 128 LKPL-----------KASALLEAMATCARAARLESEH--RLATTVFHA-------SSEAI 167

Query: 357 LLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQG 416
           ++ + + R+  VNP+FT IT +S  EV GR    L +         +  +++     W+G
Sbjct: 168 MITDAENRIVDVNPAFTRITGFSRGEVLGRNPRILQSGIQSEHFYREMWAAINQYGHWRG 227

Query: 417 EFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNL 476
           E  +RR+N E Y   L++ +V      + +Y+ ++ D+++ K A+ RI  LA+ D LT+L
Sbjct: 228 EIWNRRRNGELYPEWLAVDRVLSPEGAVLNYVAMWSDISERKEAEARIHYLAHYDALTDL 287

Query: 477 GNRPAFIRSLDERF------ARDGESSMCLLLVDIDNFKRINDSLGHQTGDKLLISLARR 530
            NR  F    ++RF      AR  + S+ L+ VD+D FK +ND+LGH+ GD+LL  +A R
Sbjct: 288 PNRVLF----NDRFTQALIHARRYDQSVALMFVDLDRFKVVNDTLGHRVGDELLKQVAER 343

Query: 531 LRNSLHSGGILARFASNEFAVLLDDTSLE-DGQGVAQQLLCTLDKPMFVDNQLINVTASV 589
           LR  +     ++R   +EF VLL +  +  D   V+ ++L  L +PM+ +   ++VT S+
Sbjct: 344 LRRCVREEDTVSRQGGDEFVVLLANLDMSADAAVVSDKILEALAEPMYFEGHELSVTCSI 403

Query: 590 GLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALT 649
           G+AC P  G DP +LMKNA LA+++AK+ G++  Q F+  L   A  +L +EN +RRAL 
Sbjct: 404 GIACYPSDGADPDTLMKNADLAMYRAKSVGRNNYQFFSPELEQGALTRLTLENAMRRALD 463

Query: 650 QNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVR 709
           ++E ++ Y P++   SGRLL LEAL+RW HPERG++ P QFI +AEE+GL++PI  WV+R
Sbjct: 464 RDEFELHYLPQVDNPSGRLLSLEALIRWQHPERGLLLPSQFIPLAEESGLVLPISLWVLR 523

Query: 710 QACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLL 769
           +        R+  L  + VAINL   Q   PD   ++  IL EE +    +ELE TEG L
Sbjct: 524 RVARQLADWRRQNLTLVPVAINLCEAQLRQPDFAEALGRILSEEGVEGRWIELEFTEGAL 583

Query: 770 LEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDD 829
           +  +E   R L  LK LG+ + +DDFG GYS+L+ L++ P+D LKIDRS + ++  N+DD
Sbjct: 584 MHDTERNLRVLSALKRLGVGITLDDFGVGYSNLNVLRRLPVDTLKIDRSLVTDVTRNEDD 643

Query: 830 MEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELAERLKR 889
             I  A+++MA ++ LKVVAEG+ET +Q  F +   C   QG+ F + I   E+A  L  
Sbjct: 644 AVIVDAIISMAQSMNLKVVAEGVETADQAGFFKARACAEIQGHFFSKAIGAVEVAAMLGH 703

Query: 890 YP 891
            P
Sbjct: 704 AP 705