Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  381 bits (979), Expect = e-109
 Identities = 233/602 (38%), Positives = 336/602 (55%), Gaps = 18/602 (2%)

Query: 309 RAWQSDEIAFAGELADQFAQVITN-----HKRRAAASALHLFQRAVEQSASAFLLVNRDG 363
           +A Q D IA     + +FA +  +     H  R+    L L+   +EQS  A  + + + 
Sbjct: 367 KAGQYDGIAGQAPGSVEFASLFDSLQDMAHTIRSREDQLRLWASVLEQSREAVFVTDAEN 426

Query: 364 RVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRK 423
           R+  VN +F A+T Y+ +EV+GR    L +  +      +   SL     WQGE   R K
Sbjct: 427 RILLVNRAFVAVTGYTLEEVRGRTPRFLQSGRHDEAFYVNLWRSLRETGHWQGEIWDRAK 486

Query: 424 N--LEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPA 481
           +  + P W   +IS V      +++YI IY D+T+ K AQ RI+ LA  D LT L NR  
Sbjct: 487 DGRIHPQWA--AISAVADAAGTVSNYIAIYSDLTEHKAAQDRIQFLAQHDPLTGLPNRML 544

Query: 482 FIRSLDERFA---RDGESSMCLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSG 538
               L    A   R+G   + +L +D+D FK INDSLGH  GD+L+  + +RL++++   
Sbjct: 545 LQDRLTVAIAAAAREGHE-VGVLFIDLDRFKTINDSLGHSVGDELIKGVTKRLQDAVRES 603

Query: 539 GILARFASNEFAVLLDDTSL-EDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLH 597
             ++R   +EF V+L      ED   VA  +L  L  P  +  + + VTAS+G++  P  
Sbjct: 604 DTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQLTAPFNIAGKELRVTASIGISVFPAD 663

Query: 598 GVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFY 657
           G D   L+KNA  A+  AK  G++  Q F   +NA A  +L +EN+LR A+ + E  +FY
Sbjct: 664 GEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERLALENSLRGAVQRKEFVLFY 723

Query: 658 QPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMS-- 715
           QP++ +RSGRL+G EAL+RW   + G + P  FI +AEETG I+ IG WV+ +AC     
Sbjct: 724 QPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILEIGDWVLAEACRQQVQ 783

Query: 716 --QQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLLLEAS 773
             QQ    GL  + VA+NLS  QF       ++  I+ +  LP   +ELELTE +++E  
Sbjct: 784 WDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVGDYPLPAGRIELELTESIVMEEP 843

Query: 774 EDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEIT 833
           E     L ELK  GL L++DDFGTGYSSLSYLK+FP+D LKID SF+ +I ++  D+ I 
Sbjct: 844 EQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLDKLKIDASFVRDIVNDSADLAIV 903

Query: 834 SAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELAERLKRYPRG 893
            AVV++ H+L LKVVAEG+E   +L  L    CD+ QGY F RP+P  E    +  Y   
Sbjct: 904 HAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCRPVPAEEFQAWVAAYVPV 963

Query: 894 PV 895
           P+
Sbjct: 964 PL 965



 Score = 27.7 bits (60), Expect = 0.004
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 290 IRVDGQVIGVLCLEQSGQPRAWQSDEIA 317
           +  +GQ  G L  + +G P AWQ D ++
Sbjct: 139 VEKNGQEAGFLSFDNAGAPLAWQQDSLS 166