Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  391 bits (1004), Expect = e-113
 Identities = 223/553 (40%), Positives = 330/553 (59%), Gaps = 6/553 (1%)

Query: 342 LHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELL 401
           L+L       +    ++ + +GRVE VNP+F  IT Y   E+QG  L  L +        
Sbjct: 89  LNLASAVFSAAREGIVVTDLEGRVEAVNPAFCQITGYGEAELQGFNLRLLKSGRQDGAFY 148

Query: 402 FDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQ 461
                 L     WQGE  +RRKN E Y   L+IS V  +  +   Y+G++ D++  + ++
Sbjct: 149 RQLWRDLLESGHWQGEIWNRRKNGETYPQWLTISTVRDEAHQPVSYVGVFLDLSPIRRSE 208

Query: 462 QRIERLAYTDNLTNLGNRPAFIRSLDERF---ARDGESSMCLLLVDIDNFKRINDSLGHQ 518
           Q++  LA+ D LT+L NR  F+  L+      AR+G S   L L D+D FK +NDSLGH 
Sbjct: 209 QKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGGSGAVLFL-DLDRFKDVNDSLGHP 267

Query: 519 TGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTSL-EDGQGVAQQLLCTLDKPMF 577
           TGD+LL ++A RLR  L     LAR   +EF +LL+  +  E    VA++LL  L  P  
Sbjct: 268 TGDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETAATPERAAVVAEKLLEQLAAPFR 327

Query: 578 VDNQL-INVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASY 636
           +D++  + V AS+G+   P  G +  +L+++A  AL++AKA G+H  + ++E    +A  
Sbjct: 328 LDDRSEVYVGASIGICLYPADGDNATTLIQHADSALYQAKAAGRHTFRFYSEAQTRQADA 387

Query: 637 KLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEE 696
           +L +E  LRR L + E  ++YQP++ LR+  L G+EAL+RW  P   ++ P +FI +AEE
Sbjct: 388 RLALEAALRRGLEKEEFLLYYQPQVDLRTASLEGVEALVRWRLPGGELVPPARFIPLAEE 447

Query: 697 TGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALP 756
           TGLI+P+G+WV+RQAC   QQ    GL    VA+NLS +QF   DL+  I+ IL E  L 
Sbjct: 448 TGLILPLGEWVLRQACRQMQQWVARGLPIRRVAVNLSSRQFRQADLLQRINAILAETGLA 507

Query: 757 PHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKID 816
           P  LELE+TE LL++ S     +L+ L+A+G+ LA+DDFGTGYSSLSYLK+FP+  LK+D
Sbjct: 508 PRYLELEITESLLMDNSAQVDAKLEALEAMGIRLAIDDFGTGYSSLSYLKRFPLHTLKLD 567

Query: 817 RSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDR 876
           RSFI +I D+     I ++++ +  +L + ++AEG+ET +Q   L ++ C   QGYLF  
Sbjct: 568 RSFIRDIADDPVSSNIVASIIELGQHLDMDILAEGVETDQQRGILLQNGCRTCQGYLFSH 627

Query: 877 PIPGRELAERLKR 889
           P+P  EL  R  R
Sbjct: 628 PLPAEELEARWLR 640