Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  392 bits (1007), Expect = e-113
 Identities = 236/647 (36%), Positives = 361/647 (55%), Gaps = 24/647 (3%)

Query: 239  PEAIDASRFPDYLDALHASRAIDAHNAGHDPR-TRALAQSM-RPENKAMLDASIRVDGQV 296
            P+ + A  +P   D +  +     +  G + R TR + +++ RP N A+L    R DG V
Sbjct: 637  PDTLFAQGYPTLEDMVRFNARRGEYGPGDEERRTRGVLRALQRPNNTAVLRE--RPDGTV 694

Query: 297  IGVLCLEQSGQPRAWQSDEIAFAGELADQFAQVITNHKRRAAASALHLFQRAVEQSASAF 356
            + +  +                 G     +  +   H+   A + L L ++    S  A 
Sbjct: 695  LEIRQVNLGD-------------GSTIIIYTDITARHR---AEAELKLAEKVFANSPEAI 738

Query: 357  LLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQG 416
            ++ ++  R+  VN +F  IT Y+ +EV G+    L +  +  +        L    +W G
Sbjct: 739  MICDQGNRIISVNRAFCDITGYAQEEVLGQDPRMLASGRHDKDFYRQMWEILRDTGAWAG 798

Query: 417  EFKSRRKNLEPYWGQLSISKVYG-DNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTN 475
            E   RRKN E Y   ++I+ V+   +  LTHYI ++ D+T+ K  + RI  LA+ D LT 
Sbjct: 799  EIWDRRKNGEIYPKWMTINAVHDTQSGALTHYITLFSDITERKETEARIHHLAHHDPLTG 858

Query: 476  LGNRPAFIRSLDERFA--RDGESSMCLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRN 533
            L NR      L++  A  R     + ++ +D+D FK INDSLGH  GD LL+ +A RLR+
Sbjct: 859  LPNRFTLEARLEQSLADARRHGHKVAVMFMDLDRFKTINDSLGHAVGDSLLMEIAHRLRS 918

Query: 534  SLHSGGILARFASNEFAVLLDDTS-LEDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLA 592
            ++     +AR   +EF V+L D     D   VA +++  + + + V    ++ +AS+G++
Sbjct: 919  AVRESDTVARLGGDEFVVVLPDVEGANDAAHVAGKIIEDVARSLRVGAHELHTSASIGIS 978

Query: 593  CAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNE 652
              P  G    ++M+NA  A++ AKA G++  Q F   +N  A+ +L +E  LR+A+  +E
Sbjct: 979  LYPDDGETVPTVMQNADTAMYHAKAIGRNNFQFFASAMNRAATERLELERKLRQAMVNDE 1038

Query: 653  LDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVRQAC 712
            L++ +QP+  L + R+ G+EALLRW HPE G+I PD+FI +AEETGLI+ IG WV++ AC
Sbjct: 1039 LELHFQPQFALAADRVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAAC 1098

Query: 713  CMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLLLEA 772
               +     GL  L +A+NLS +Q  + +  + ++ IL+E  LP  LLELE+TE  ++E 
Sbjct: 1099 RQLKAWLDQGLPPLRMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMER 1158

Query: 773  SEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEI 832
             E+    L  L  +G+TLA+DDFGTGYSSLSYLK FPID LKIDRSF+ +I  + DD  I
Sbjct: 1159 PEEAITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAI 1218

Query: 833  TSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIP 879
                +A+AH+L L+VVAEG+ET  QL  L    CD  QGY F RP+P
Sbjct: 1219 ARGTIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQGYFFSRPLP 1265