Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  403 bits (1035), Expect = e-116
 Identities = 220/553 (39%), Positives = 336/553 (60%), Gaps = 5/553 (0%)

Query: 335  RRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPAL 394
            RR A   L L  +  E ++   ++ +R+ R+  VN +F  IT Y+  EVQGR    L + 
Sbjct: 599  RRRAEEQLRLSAKVFEGASEGIVICDRNNRIMSVNRAFVEITGYAEAEVQGRDPRVLNSG 658

Query: 395  ENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDV 454
             + +    +    L    +WQGE  +RRK  E Y   LSI+ V  +  E+++Y+ ++ DV
Sbjct: 659  RHDAAFFANLWHHLKTAGTWQGEIWNRRKGGEVYPEWLSITTVRDEAGEVSNYVAVFADV 718

Query: 455  TQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFA---RDGESSMCLLLVDIDNFKRI 511
            ++ K  ++ I  LA  D LT L NR      L +  A   R+ ES + L+ +D+D FK I
Sbjct: 719  SERKRNEEHIRFLAEHDYLTGLPNRSLLHDRLQQAIALAERNSES-LALMFIDLDRFKNI 777

Query: 512  NDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTSL-EDGQGVAQQLLC 570
            NDSLGHQ GD+LL  + RR++  + S   ++R   +EF +LL      +D   VA++LL 
Sbjct: 778  NDSLGHQVGDQLLQEVGRRIQACVRSADTVSRPGGDEFIILLPSIETPQDAARVAEKLLE 837

Query: 571  TLDKPMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVL 630
            +L++P  +    + +TAS+G+A  P  G D  +L+KNA  A++ +K  G+     FT  +
Sbjct: 838  SLNRPYQLGGHELVITASIGIAVFPEDGRDFQTLVKNADAAMYYSKEAGRDSFHFFTPDM 897

Query: 631  NAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQF 690
            NA    +L +EN+LRRAL + E  ++YQP++ + SGR++G EAL+RW HP+ G++ P +F
Sbjct: 898  NARVFERLSLENSLRRALERQEFLLYYQPQVDMPSGRVIGFEALIRWQHPQMGLVSPARF 957

Query: 691  ISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTIL 750
            I VAE++GLI+PIG+WV+ +AC  ++  ++ G+  + VA+N+S  QF  P   AS+   L
Sbjct: 958  IPVAEDSGLIVPIGEWVLGEACRQNRAWQEQGMPAVPVAVNISALQFRQPQFEASVERAL 1017

Query: 751  KEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPI 810
             E  L P  LELELTE ++L   +     LD LKA G+ L++DDFGTGYSSL+YLK+ P+
Sbjct: 1018 AESGLEPAWLELELTESMMLHQGQGATDLLDRLKARGVRLSIDDFGTGYSSLAYLKRLPL 1077

Query: 811  DILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQ 870
            D LKID++F+ +I  +     IT+ ++ MAHNL L V+AEG+ET  QL FL+ H C   Q
Sbjct: 1078 DKLKIDQAFVRDIASDAGGAAITATIIQMAHNLGLSVIAEGVETEAQLEFLQAHDCASAQ 1137

Query: 871  GYLFDRPIPGREL 883
            G+ F RP+P  ++
Sbjct: 1138 GFYFARPMPAADI 1150