Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  452 bits (1164), Expect = e-131
 Identities = 239/572 (41%), Positives = 358/572 (62%), Gaps = 2/572 (0%)

Query: 320 GELADQFAQVITNHKRRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYS 379
           G+L    A V    +R+ A   L    RAVEQS +  ++ + +G +EYVNP FT  T YS
Sbjct: 300 GQLLGGIAIVEDATERKRAELQLRQLSRAVEQSPATIVITDTNGVIEYVNPKFTRTTGYS 359

Query: 380 TDEVQGRQLGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYG 439
            +E  G +   L + E   E+  +  S++A G  W+G F +RR+N E YW   +IS +  
Sbjct: 360 AEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYWEHATISPITD 419

Query: 440 DNRELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFA--RDGESS 497
           DN+ +TH++ + ED+T+ +  + RI +LAY D LT L NR      + +  A     + +
Sbjct: 420 DNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAEREQET 479

Query: 498 MCLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTS 557
           + LL +D+DNFK +NDSLGH TGD+LL S+A+RL+  +     ++R   +EF V+L D  
Sbjct: 480 LALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVVLADAQ 539

Query: 558 LEDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKA 617
           L+    VA++++  + +P  +D   + VT S+G++  P    D  SL+KNA  A+++AK 
Sbjct: 540 LDGASQVARKIIDRVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLKNADTAMYQAKE 599

Query: 618 NGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRW 677
           +G++  Q FT  +N  A  +L +EN LR+A+ + E  + YQP++ + SGR++G EAL+RW
Sbjct: 600 SGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSGRVIGAEALVRW 659

Query: 678 NHPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQF 737
            HPE GM+ P +FI VAE++GLI  IG WV+ +AC  ++  ++AGL  + VA+NLS  Q 
Sbjct: 660 LHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAIPVAVNLSAVQL 719

Query: 738 SDPDLVASISTILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGT 797
              +L  S++ +L+   L    LELELTE  ++E +E T R L  L  +G+ L++DDFGT
Sbjct: 720 RQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDEMGVMLSIDDFGT 779

Query: 798 GYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQ 857
           GYSSLSYLK+FPID LKID+SF+ +I  + DD  I  A+++M H+L+L+V+AEG+ET EQ
Sbjct: 780 GYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLRVIAEGVETAEQ 839

Query: 858 LAFLRRHRCDVGQGYLFDRPIPGRELAERLKR 889
           L  L RH CD  QG+ F RP+P  E A  L R
Sbjct: 840 LEILHRHGCDEAQGFHFGRPMPADEFAAYLAR 871



 Score = 83.2 bits (204), Expect = 6e-20
 Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 16/298 (5%)

Query: 181 RLARHRYSAGNSLLEAAQLITQSACEIYKVDCASIWHLEDQRLEPIIA--WYRDAQEHRQ 238
           RL+R  + A   L E    +T++A  +  VD   IW  +D +     A  + R    H  
Sbjct: 35  RLSRAEFLAQAGLEEIYPYLTETAARLLGVDRVGIWLFDDSQCTIRCADLFERAGGSHSS 94

Query: 239 PEAIDASRFPDYLDALHASRAIDAHNAGHDPRTRALAQS-MRPEN-KAMLDASIRVDGQV 296
            + +  +  P Y  AL +   I A +A H P TR L  + + P    A+LD  +R  G++
Sbjct: 95  GQRLQEADCPAYFAALESGEPIVADDALHHPATRDLNDAYLTPHGIGALLDYPVRQQGRL 154

Query: 297 IGVLCLEQSGQPRAWQSDEIAFAGELADQFAQVITNHKRRAAASALHLFQ----RAVEQS 352
            GVLC EQ+G  R W  ++      LA+  +  + +   R + + LH  +    R +E  
Sbjct: 155 AGVLCHEQAGPARPWNEEQRLLGVALANLVSLALEHAALRQSQAQLHSLEERYLRLLEFC 214

Query: 353 ASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELLFDSPSSLAMGN 412
            +  +  + +  + Y N  F  I     + +Q   + +L     L  L     +++  G 
Sbjct: 215 PTGIIHYDTELHITYSNQQFANIIGVPLERLQDLDMAKLQDQRPLPAL-----AAVLEGR 269

Query: 413 S--WQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQQRIERLA 468
           +  ++GE+++     +  W  L  + V     +L   I I ED T+ K A+ ++ +L+
Sbjct: 270 TGRFEGEYRASLSGRQ-LWVSLVAAPVLDQGGQLLGGIAIVEDATERKRAELQLRQLS 326