Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  344 bits (883), Expect = 1e-98
 Identities = 197/552 (35%), Positives = 315/552 (57%), Gaps = 8/552 (1%)

Query: 341 ALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSEL 400
           +L L     + S+ A  +++ +G +  VN +FT IT YS  E++G+ +  +    N  E 
Sbjct: 445 SLKLSALVYDNSSEAMSVLDENGVIITVNAAFTDITGYSESEIRGQHIRMMYCDLNGHEF 504

Query: 401 LFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLA 460
                  +     WQGE + RR+N E Y   L+I+ +   +      + ++ D+T  K +
Sbjct: 505 YQQMNDDIRNKGEWQGEMRQRRRNNEEYVIWLTINTIKDKDGLPHRRVALFSDITDKKQS 564

Query: 461 QQRIERLAYTDNLTNLGNRPAFIR--SLDERFARDGESSMCLLLVDIDNFKRINDSLGHQ 518
           +  I + A  D LT L NR   +   S + + A    +   L+ +D+D FK +ND+LGH 
Sbjct: 565 EHLIWKQANYDTLTGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFKEVNDTLGHA 624

Query: 519 TGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTSLEDGQG---VAQQLLCTLDKP 575
            GD LLI  A RL++ +    ++AR   +EF V+L  +S+ D +G   VA+ +L  + +P
Sbjct: 625 MGDLLLIETASRLKSCVRDADVVARLGGDEFTVVL--SSMADHKGIERVAEHILRRIAEP 682

Query: 576 MFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEAS 635
            ++  +  +++AS+G+   P        L+K+A  A++ AK  G+++   FT  +   A 
Sbjct: 683 YYLGEETTHISASIGITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYFTPSMQEYAK 742

Query: 636 YKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVAE 695
           Y++ + ++LR+A+   E ++ YQP + + +G +L  EALLRW HPERG + P +FI VAE
Sbjct: 743 YRMRLIHDLRQAVLNKEFELHYQPIVTMATGEVLKAEALLRWFHPERGSVSPAEFIPVAE 802

Query: 696 ETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPD-LVASISTILKEEA 754
           +TGLI+ IG WV  QA   S Q RK     + +++N SP QF D   L+ +   +L++  
Sbjct: 803 DTGLIVEIGNWVFEQAARQSAQWRKTLGVEIQISVNKSPIQFRDEGALLHNWLELLQQLD 862

Query: 755 LPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILK 814
           +    + +E+TEGLLL+AS     +L   +  G+ +++DDFGTGYSSL+YLKKF ID LK
Sbjct: 863 VTGAGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLK 922

Query: 815 IDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLF 874
           ID+SF   I  +++D  +  A++ MAH L +KV+AEG+ET  Q   L R  CD GQGYLF
Sbjct: 923 IDQSFTRNIDTDENDHTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLRAGCDYGQGYLF 982

Query: 875 DRPIPGRELAER 886
            +P+   E A +
Sbjct: 983 SKPVSASEFASK 994