Pairwise Alignments

Query, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 539 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  330 bits (846), Expect = 8e-95
 Identities = 212/543 (39%), Positives = 324/543 (59%), Gaps = 10/543 (1%)

Query: 3   LRNMNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTALN 62
           +  +  A R ++GFA+  L ++ L +++L  +  +R     I +   P I  +  + A  
Sbjct: 1   MTRLTTAQRIVIGFAIAPLALIALALYALSDLAMLRDQAEQIVRQDWPKIDPI-MVIATG 59

Query: 63  LRMRTLSYR-LLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQL 121
           +R    + R LL+++  A  + ++D   QR   I +A     P+    + +AA+ +  + 
Sbjct: 60  VRDNARNTRDLLIDKNNAQVQQSIDATRQR---ITQAFATLEPLFDQPEGKAAYAELKKR 116

Query: 122 LNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEKA 181
              Y     +++ L +    DE    L + ++    ++ K ++ ++ +           A
Sbjct: 117 REAYVAAFVQVQALIRQGATDEAMTQLKQGVIPAELEVYKSLEGMMAMQGKVFVEREHLA 176

Query: 182 ANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPI----EEALKCAEQVADGDLTHVI 237
             +Y  A   ++ L++A   L    A L+TRS+ +P+     +A +    +A GDLT  +
Sbjct: 177 QARYNDARRNMLALVLACLALVTTVAILVTRSVTRPLGGEPNDAARVLNLIAQGDLTIRV 236

Query: 238 RAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNE 297
              G      ++  M  MQ  L   ++ IA S  ++AS++EEL+AV+ +++  LQ Q +E
Sbjct: 237 PV-GVGANDSVMSNMHDMQQSLNSMVRHIAASVDRVASSSEELSAVSSQTSSTLQLQGHE 295

Query: 298 IEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQAT 357
           IEQAA AV +MT+AV+EVARNAVSTSEAS  + ++   GR+ V ETV +I  ++  V  +
Sbjct: 296 IEQAAAAVNQMTAAVDEVARNAVSTSEASRVSEQTAQRGREQVQETVASITALAEGVTDS 355

Query: 358 AKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 417
           +  I  LA + +DI  VLDVIR +A+QTNLLALNAAIEAARAG+AGRGFAVVADEVRALA
Sbjct: 356 SGRIQQLAGRVQDISSVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALA 415

Query: 418 HRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQIN 477
           HRTQ ST EIE MIG+I+  +  AV SM+ ++E  ++TL +A+ +G ALD IA +++QIN
Sbjct: 416 HRTQDSTREIEGMIGNIRLDSGHAVSSMQNNSELVQATLLVAQRSGDALDEIAHSISQIN 475

Query: 478 ERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVA 537
           ERNL+IASA E+QA VAREVDRNLV+I +LS Q   GA  T  A  +L+++A  L+  VA
Sbjct: 476 ERNLMIASATEQQALVAREVDRNLVDIRNLSEQVMLGARHTDTAGQDLAQMAGSLHETVA 535

Query: 538 RFR 540
           RF+
Sbjct: 536 RFK 538