Pairwise Alignments

Query, 650 a.a., putative dimethylglycine dehydrogenase subunit from Pseudomonas putida KT2440

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

 Score =  100 bits (250), Expect = 1e-25
 Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 41/362 (11%)

Query: 245 CVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPIGEHGGNPHQ 304
           C+ C  C AMCPA        P  + Q           A+FA  P       +   +   
Sbjct: 137 CIDCLSCIAMCPARKYSNYPGPTLMRQL----------ARFAFDPKDEIDREKEAFD--- 183

Query: 305 PIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEVLDNL 364
                    E +++CTTC  CVE CP  I+ V   V+  R  T +KG   +   EV  N+
Sbjct: 184 ---------ENIYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFKKGYNLDSHLEVRKNV 234

Query: 365 IATDNPGGFAPGGRMNWAADLNLQLLSEVKVTEVLFWVGDGAFDMRNQRTLRSFVKVLKA 424
           ++ +      P  + ++  +++ + + E +   V F+ G    D R Q   +S ++VL A
Sbjct: 235 LSQNRS---VPKEKTSFLEEVSDEYIVENEKMRVAFFTG-CLVDFRLQEIGKSAIRVLNA 290

Query: 425 SGVDFAVLGLEERDSGDVARRLGDEATFQQLAKRNIQTLAKYKFQRIVTCDPHSFHVLKN 484
            GV   ++   +   G    R G     + L K+N++   K     +VT        LKN
Sbjct: 291 HGVS-VIIPKNQVCCGSPFIRTGQTDISESLKKQNLEIFNKLNVDSVVTLCAGCGSTLKN 349

Query: 485 EYGALGGDYQVQHHSTYIAE--LIAAKKLNLGQHKGGSVTYHDPCYLGRYNGEYEAPREV 542
           +Y      ++V   +  + +  LI  K L++      +VTYHDPC+L R    Y  PR++
Sbjct: 350 DYKE--KKFKVMDITEVLVKVGLIDYKPLDI------TVTYHDPCHLRRGQKVYLEPRKI 401

Query: 543 LKAL-GIEVREMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETEAELVAVGCP 601
           L+++  ++  EM+      +CCG GGG         + I   + + I  T+A+ +   CP
Sbjct: 402 LESIPKLKFIEME---IPDQCCGAGGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCP 458

Query: 602 QC 603
            C
Sbjct: 459 FC 460