Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 318 a.a., glycine betaine-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  230 bits (587), Expect = 3e-65
 Identities = 122/292 (41%), Positives = 169/292 (57%), Gaps = 2/292 (0%)

Query: 12  LALSSIVATPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQII 71
           + ++++ A   FAAEP +C  VR   V WTD+ AT+A A  +L+ LGY+T     S  + 
Sbjct: 15  VCMATLTAGSAFAAEPESCGTVRFSDVGWTDITATTATATTILEALGYETDVKVLSVPVT 74

Query: 72  FAGIRDKRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDKGLK 131
           +  +++K +D+FLG W P M   I P+ +    + + + +L  A+ TLA      + G+K
Sbjct: 75  YTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETV-RENLAGAKYTLATNAKGAELGIK 133

Query: 132 TFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAVDRA 191
            F DI   + EL GKIYGIEPG+  N  I  M+ K  FDL  F++VESSE GMLA V RA
Sbjct: 134 DFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQVARA 193

Query: 192 VRRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNALRL 251
            +  + +VF GW PHPMN N  + YL    D  GP+ G ATV T     Y   CPN  +L
Sbjct: 194 EKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNVGKL 253

Query: 252 LANLKFSAEDESRMMQPLL-DHKDALESARQWLKDHPEDKARWLEGVTTFDG 302
           L NL FS + E+ +M  +L D +D  ++A  WLKD+P+    WL GV T DG
Sbjct: 254 LQNLSFSLQMENEIMGKILNDGEDPEKAAAAWLKDNPQSIEPWLSGVATKDG 305