Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 333 a.a., amino acid uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 35/325 (10%)

Query: 1   MHSLIRRSLLPLALSSIVATPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLL-DGLGY 59
           M  L+  + L L L +  +T    +  A C  V +  +NW      S + + +L +G G 
Sbjct: 1   MKKLLASTCLMLGLIAGAST----SSAAECGTVTIASMNWQSAEVLSNLDKFILNEGYGC 56

Query: 60  QTKQTSASQQIIFAGIRDK-RLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARAT 118
             + T          + +K + D+    W  ++   +    D  +   +  P  +     
Sbjct: 57  SAEITIGDTVPTITSMAEKGQPDIAPEAWIDLLPDVVKKGQDDGRIITVGSPLPDGGVQG 116

Query: 119 LAVPKYLYDK--GLKTFADIHKF-------EKELGGKIYGIEPGSGANTQIKAMITKNQF 169
             +P+YL D    +KT  D  K        E    G I     G G       + +    
Sbjct: 117 WWIPQYLADAHPDIKTIGDALKHPELFPASEDPSKGAILNGPQGWGGTVVTTQLFSAFDG 176

Query: 170 DLGKFQLVES-SEAGMLAAVDRAVRRKEAVVFFGWAPHPMNVNIDMAYL--GDSQDALG- 225
           +   F LV++ S AG+  A+ +A  RKE ++ + W+P  +     M  L  G   DA   
Sbjct: 177 EKAGFTLVDTGSAAGLDGAIAKAYERKEGLLTYYWSPTALLGKYKMVKLDPGVPHDAAEW 236

Query: 226 ---------PDEGR-----ATVWTVTAPDYAERC-PNALRLLANLKFSAEDESRMMQPLL 270
                    PD         T+ T+ A  ++ER  P  +  L    +S E  S++M  + 
Sbjct: 237 KRCNTVADCPDPKPNAWPVDTIVTLVAKPFSERVGPEVMDYLTKRSWSNETVSQLMAWMT 296

Query: 271 DHK-DALESARQWLKDHPEDKARWL 294
           D++    E A+++L+++ +  ++W+
Sbjct: 297 DNQASGEEGAKRFLEENEDMWSKWV 321